Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq107 192 9e-43
seq135 122 1e-21
seq61 118 2e-20
seq108 113 7e-19
seq111 111 2e-18
seq120 86.0 1e-10
>seq107
Length=347312
Score = 192 bits (212), Expect = 9e-43
Identities = 198/259 (76%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| ||||||||||||| ||| |||| ||||||||||| || | |||||| ||
Sbjct 17634 TGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 17575
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| |||||| ||||| || | ||||| ||| | ||||| | ||||| | || |||
Sbjct 17574 TAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCG 17515
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||| | ||||||||||||||||||| | || ||||| ||||| ||||| ||
Sbjct 17514 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCA 17455
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
||||| || ||||||| | ||| || || ||||| |||||| | | ||| |||
Sbjct 17454 ATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCG 17395
Query 2073781 GCATTGAAGAGCGTGGGCG 2073799
|| ||||||||||| ||||
Sbjct 17394 GCGTTGAAGAGCGTCGGCG 17376
Score = 141 bits (156), Expect = 1e-27
Identities = 291/439 (66%), Gaps = 0/439 (0%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGC 2071633
||| || || ||||||||||| ||| | |||| | | || || ||||||| |||||
Sbjct 18074 ACTCGATGATCTCGGTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTG 18015
Query 2071634 TGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCG 2071693
|| ||| |||||||||||| |||||| |||| || || |||| ||| |||
Sbjct 18014 ATTTCTTGTTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCT 17955
Query 2071694 TGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNN 2071753
|| || || |||||| | ||||||| | || || | ||||||||||
Sbjct 17954 CGAGAATTGCGTACCAAAGCTTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTT 17895
Query 2071754 NNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCT 2071813
| | |||| || | |||| | | ||||| |||||||| || |
Sbjct 17894 CGTATTTCTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTT 17835
Query 2071814 CGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGC 2071873
||| ||||| ||||| | ||| |||||| | | | | || || ||| || || |||
Sbjct 17834 CGGCGGGGCAGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGG 17775
Query 2071874 ACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 2071933
|||| || | | |||||||| || || ||| |||||||||||||| |||||
Sbjct 17774 GAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGC 17715
Query 2071934 TCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 2071993
||||| || | || | || ||| |||||||||||||| |||||| || ||||| |
Sbjct 17714 GAAGGTCCAGGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTC 17655
Query 2071994 CCTTGCGCTTGCCGCCGCC 2072012
| |||||| ||| ||
Sbjct 17654 CGGGACGCTTGTTGCCACC 17636
Score = 111 bits (122), Expect = 2e-18
Identities = 174/242 (72%), Gaps = 8/242 (3%)
Strand=Plus/Minus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
||||||||||| |||| ||| || | |||| | || ||||||| |||||||| ||
Sbjct 19235 TGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATACCC 19176
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCG 2069368
||||| || || || ||| ||||| |||||||||||||| | || ||| |||
Sbjct 19175 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGA--GCTGCGCCATCGTCG 19118
Query 2069369 GG-ACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427
|| || || ||| || ||||||||| || |||||||| ||| | || ||||||
Sbjct 19117 GGCTCGACA-AGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGATCGGCC 19059
Query 2069428 GCCATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAG 2069486
| || ||||| | | | ||| || | |||||| ||||||||| | | |||||||||
Sbjct 19058 GACAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAG 19000
Query 2069487 AT 2069488
||
Sbjct 18999 AT 18998
>seq135
Length=558922
Score = 122 bits (134), Expect = 1e-21
Identities = 146/198 (74%), Gaps = 3/198 (2%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| | |||||||| ||| || || ||| |||||| |||||||||
Sbjct 88022 GCCTCGGCTGACTGGACCTCACCAGAGAATCGCTCGACCAAGTTCTCGTTGACGATGCCG 87963
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| ||||||||||||||||||||||||| ||| |||| ||||||||| |||||
Sbjct 87962 TCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAGC 87903
Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
| |||||| | | |||| | | ||| | ||| |||||||||||||||||
Sbjct 87902 TTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTCCATCTCTTCGGCGGTCCAAAAGGAT 87843
Query 796327 GCCTCGGCCTTTTTGTAC 796344
||||||||||| ||||||
Sbjct 87842 GCCTCGGCCTTCTTGTAC 87825
>seq61
Length=200753
Score = 118 bits (130), Expect = 2e-20
Identities = 163/227 (72%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
|||| || || || |||| ||||||| ||| ||| || ||| | | ||||| || || |
Sbjct 54442 CCTTCGTGCCTTCCGAGATGGCGTGCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCG 54383
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
||||||||||||||| | ||| || ||| | |||| || ||| || ||
Sbjct 54382 AGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGC 54326
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|| ||| || ||||||| || | ||||||||||| |||||||| | |||| |||||
Sbjct 54325 ACGCTTCGATGGCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATCAGCATCG 54266
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| || || || ||||||||| || ||||| | |||||||
Sbjct 54265 CCTTGTTCGAAATACCGGTGTCGGGGTGGACTTGCTTCAACACCTTG 54219
>seq108
Length=1268086
Score = 113 bits (124), Expect = 7e-19
Identities = 163/227 (72%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
||||||| || || |||| ||||||| ||| || ||| || | | ||||| ||| || |
Sbjct 165438 CCTTGGTGCCTTCCGAGATGGCGTGCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCG 165379
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
|||||||||||||| | |||||| ||| | |||| | |||||| || |
Sbjct 165378 AAGTCTGGATCTCGCGCGACGTGATCGTCGCCTTGTGGTTGT-ATTGCGCG--AGCTTGG 165322
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|||||| | |||||| || | ||||||||||| |||||||| | ||| |||||
Sbjct 165321 ACGCCTCGAGGGTGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCG 165262
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| ||| ||| ||||| |||||| | | ||| |||
Sbjct 165261 CCTTGTTCGAGATACCCGTGTCCGGGTGAACCTGCCTCAACACTTTG 165215
>seq111
Length=630077
Score = 111 bits (122), Expect = 2e-18
Identities = 159/221 (72%), Gaps = 5/221 (2%)
Strand=Plus/Minus
Query 796140 AAAACACCTGGCCTCGGGTACTTGGACCTC-CTTCATGAAGCGGCCGGCCAGGTTCTCAG 796198
||| ||||| ||||||| | || ||||| ||| | ||| | | ||| |||||||
Sbjct 393208 AAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGA-GAACCTCTCAACCAAGTTCTCAT 393150
Query 796199 CCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGT 796258
||||| || || |||||||| |||||||| ||||| |||||||| || ||||
Sbjct 393149 TCACGACCCCATCTGAAGCGGCGAAGAAGGCGAGCACGTGGGCGATAAAGTAGCGTTCGT 393090
Query 796259 CGTCGCTGAGCGAGAC---CCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGG 796315
||| | ||||| | ||||| | |||| ||||||||||| ||| |||||||
Sbjct 393089 CGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGCTGCCGAGGTCGATCTCTTCGGCGG 393030
Query 796316 TCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356
||||||||| || | ||| | ||||||||| |||| |||
Sbjct 393029 ACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAATC 392989
>seq120
Length=764448
Score = 86.0 bits (94), Expect = 1e-10
Identities = 170/252 (67%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 2019147 GACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGC 2019206
|||||||| || | ||||||| | ||| ||||| || || || || ||
Sbjct 374979 GACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGGGT 374920
Query 2019207 CGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCC 2019266
||||||||| | |||||||||| || ||||| | | || ||| |||||||| ||
Sbjct 374919 CGCCACAAGCTCGTCATCCTCGACGAAGCCGATTCGATGACCCCGGGAGCCCAGCAAGCG 374860
Query 2019267 CTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACG 2019326
||||| ||| ||||||| | | ||||||| || || || || | || |||||| |
Sbjct 374859 CTCCGCAGGACGATGGAAATCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACCAG 374800
Query 2019327 TCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTC 2019386
| | ||||||| | | ||||| || |||||||||||| | | || | ||
Sbjct 374799 AGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCATCTTGAGGTACTCGAGGCTG 374740
Query 2019387 ACCGACGCCCAG 2019398
||||| ||| ||
Sbjct 374739 ACCGATGCCGAG 374728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916222678472897
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |