Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq107 260 1e-64 seq115 136 4e-27 seq82 134 1e-26 seq120 129 6e-25 seq46 125 7e-24 seq135 100 3e-16 >seq107 Length=347312 Score = 260 bits (288), Expect = 1e-64 Identities = 831/1257 (66%), Gaps = 39/1257 (3%) Strand=Plus/Minus Query 148533 GCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTG 148592 |||| ||||| || ||||| |||| ||| ||| || |||||| || ||| ||||| Sbjct 18408 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 18349 Query 148593 AGCA-GCGCCGCCGACTCGCTT-TCGTACGGCATACGC--AGCCGCACAAACGCGTCGGC 148648 ||| |||| ||| | || ||| ||||||| ||| || | || ||||||||||| Sbjct 18348 AGCTTGCGC-GCCT-CGGGCGAATCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCGGC 18293 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 || || || || || | ||| ||||| ||||| | |||||| |||| ||| Sbjct 18292 GAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTGCGC-CTCGA 18234 Query 148709 -GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTA 148766 || ||||||| ||| ||||||||| || |||| ||| | || ||||| Sbjct 18233 TGACAGGATAGTAATTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGACG 18175 Query 148767 ATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGCGA 148824 | | ||| | || ||| |||||| | | | |||| | |||| || |||| Sbjct 18174 ACCTCGTGCAACTTTTTAAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAACGCGA 18117 Query 148825 TAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGC 148884 | ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| || Sbjct 18116 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGC 18057 Query 148885 ACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944 ||| || | |||||| || | ||||||||| || || |||| |||| Sbjct 18056 ACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGT 17997 Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGAT 149001 ||||||| |||||| | || ||||||||| ||||| | || | || | ||| | Sbjct 17996 CCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAA 17937 Query 149002 GCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACA 149061 || | |||||| | | | || | ||| ||||||| |||||| ||| Sbjct 17936 GC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACA 17880 Query 149062 -GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CACAT 149119 | ||| |||| | ||||| ||| |||| ||| |||||| ||| ||||| || | Sbjct 17879 AGGCGCG-GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGGGCAGAA 17822 Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179 ||| | |||| ||||| | || | || |||| ||| || |||||||| | ||||||||| Sbjct 17821 GAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 17762 Query 149180 GTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGC--CCATGTTGCG-GCGCAGGTTGAG 149236 | | ||| || || || || | |||| | || || | | ||| |||| || Sbjct 17761 AAAGAAGAGATCACGAGC---GCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAG 17705 Query 149237 CACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC-- 149294 | || | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 17704 GAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTT 17645 Query 149295 -TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 ||||| || |||||||||| |||| || ||||||| | || || | ||| || | || Sbjct 17644 GTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGAT 17585 Query 149354 GCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCA 149412 ||| | | ||| |||||| || | ||| |||| || || | ||||| | Sbjct 17584 GCCGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGA 17526 Query 149413 CGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAG 149471 | | | ||||| || ||| || ||| |||||| |||||| ||| |||||| | Sbjct 17525 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTGAGCGTGTCG 17467 Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 || ||||| || || || |||||| || | ||| || || || | | ||||| Sbjct 17466 TAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 17407 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 | |||| ||||| ||| | || || |||||| ||||| || || | ||| Sbjct 17406 TGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATG 17347 Query 149592 ATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | | ||| |||| | ||||| || ||||| | || |||||||| | |||||| ||| Sbjct 17346 AGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGC 17287 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT 149711 || ||||| |||||||| || || || || ||| | || ||||||||| | Sbjct 17286 ATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGC 17227 Query 149712 TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || || || ||| |||||||||| |||||| | || |||||| ||| | || |||| Sbjct 17226 TCGAGCGTTTTGAAGCCAAAGTAATTGTAGCCGAAATCGCGGTCGTAGATAACGGCG 17170 >seq115 Length=605796 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || |||||||| || || ||||| ||| ||| ||| | | | ||||||||||||||||| Sbjct 306272 GTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAGCTGCTTGCC 306214 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || |||||||| || ||||||||||||||||| |||||| ||| Sbjct 306213 GGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTT 306154 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| ||||| ||| ||||| || || || Sbjct 306153 GACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 306094 Query 133643 TTTTACGAAAATCTGCA 133659 || || || || |||| Sbjct 306093 CTTGACAAAGATTTGCA 306077 >seq82 Length=702097 Score = 134 bits (148), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 522795 AAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 522853 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 522854 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 522913 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 522914 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 522973 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 522974 CGTAAGAGTCTTGACAAAGATTTGCCTG 523001 >seq120 Length=764448 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 228320 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 228378 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| || ||||| ||||| ||| Sbjct 228379 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTT 228438 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 228439 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 228498 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 228499 CTTGACGAAGATCTGCAT 228516 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || |||||||||||| | | |||| | | | ||||| ||||||||||| Sbjct 228092 GTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCAAGCTGCTTGCC 228150 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| || ||||| ||||| ||| Sbjct 228151 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTT 228210 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 228211 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 228270 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 228271 CTTGACGAAGATCTGCAT 228288 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 228548 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 228606 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| || ||||| ||||| ||| Sbjct 228607 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTT 228666 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 228667 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 228726 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 228727 CTTGACGAAGATTTGCAT 228744 >seq46 Length=591722 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 538496 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 538554 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| |||||||| |||||| ||| Sbjct 538555 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTT 538614 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || || || |||| |||| || ||||| || || || Sbjct 538615 GACGTTGTCAATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 538674 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 538675 CTTGACGAAAATTTGCAT 538692 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 538952 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 539010 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 539011 AGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTT 539070 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | | ||| || |||| |||| ||| ||||| || || || Sbjct 539071 GACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCCGTAAGCGT 539130 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 539131 CTTAACGAAGATCTGCAT 539148 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 538724 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 538782 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 538783 AGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTT 538842 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 538843 GACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 538902 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 538903 CTTGACGAAGATTTGCAT 538920 >seq135 Length=558922 Score = 100 bits (110), Expect = 3e-16 Identities = 179/251 (71%), Gaps = 13/251 (5%) Strand=Plus/Minus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 88793 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 88735 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || ||||||||||| || || |||||||||| ||| ||| | | |||| |||| | Sbjct 88734 AATTCCTTCTCAATTTCGACGGCCTCCTTGATGATGAGCGCG-ACGGTGT---CGGG-GT 88680 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTAC---AGGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 || |||| | || | | || || || ||||| |||||||| ||||| |||||||| Sbjct 88679 GAGGTCTTCGCT-CGAGGT-GGGAGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 88622 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 88621 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATTAAGCCACGCTTCTTGAG 88562 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 88561 CCAGAAGATGG 88551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419452464520