Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq115 105 2e-17
seq120 87.8 4e-12
>seq115
Length=605796
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| || ||||| || || || ||||| | || || || || |||
Sbjct 306079 CAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAC 306138
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || ||||| || ||| ||| |||
Sbjct 306139 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 306198
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || ||||| | || |||||||| |||||| ||
Sbjct 306199 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATC 306258
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| ||||| |||
Sbjct 306259 CAAAAAGAGTCGACTCTCCAC 306279
>seq120
Length=764448
Score = 87.8 bits (96), Expect = 4e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || |||||||| | || || || || |||
Sbjct 228513 CAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 228454
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || ||||| || ||| || ||| |||
Sbjct 228453 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAACAA 228394
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || ||||| | || | |||||||||||| |
Sbjct 228393 CGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATT 228334
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || || |||
Sbjct 228333 CAGAAGGAGTCGACGCTGCAC 228313
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || |||||||| | || || || || ||||| ||||
Sbjct 228730 CAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAA 228671
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || ||||| || ||| || ||| ||| | || |||||
Sbjct 228670 CGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAACAACGTCTCATCTT 228611
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| | || ||||| | || | |||||||||||| | ||||| |||||
Sbjct 228610 CGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATTCAGAAGGAGTC 228551
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 228550 GACGCTGCAC 228541
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || |||||||| | || || || || |||
Sbjct 228285 CAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 228226
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || ||||| || ||| || ||| |||
Sbjct 228225 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAACAA 228166
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || ||||| | || | ||||||||||| ||
Sbjct 228165 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAATATC 228106
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| || || |||
Sbjct 228105 CAAAAGGAGTCGACGCTGCAC 228085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181817423316383
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |