Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq82 93.3 4e-14 seq115 89.7 5e-13 >seq82 Length=702097 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| ||||| |||||||||||| || ||| || ||| ||| Sbjct 522792 ACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 522851 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| ||||| || || ||||| || |||||||| || || Sbjct 522852 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 522911 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | || |||| || ||| || |||| || | ||| || Sbjct 522912 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 522971 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || || ||||| || | || || ||| ||| Sbjct 522972 CCCGTAAGAGTCTTGACAAAGATTTGCCTGA 523002 >seq115 Length=605796 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||| | ||||| || | | ||||||||||| |||||||||||| || ||| Sbjct 306297 ACGCAGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGT 306238 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| || |||| |||| ||||| || || ||||| || ||||| Sbjct 306237 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCC 306178 Query 132022 TTCTTTATC 132030 ||| || || Sbjct 306177 TTCCTTGTC 306169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609871446280