Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq82 140 3e-28
seq115 125 7e-24
seq120 122 9e-23
seq46 113 5e-20
seq107 87.8 2e-12
>seq82
Length=702097
Score = 140 bits (154), Expect = 3e-28
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | || | ||| || ||||| |||||||| |||||||||||| |
Sbjct 522774 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCC 522833
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| ||||| || | ||| ||||| || |||||
Sbjct 522834 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 522893
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || || ||||| ||| | ||||||||||| || ||
Sbjct 522894 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 522953
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711
||||| || || || || || || | ||| || || || ||||||
Sbjct 522954 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 522998
>seq115
Length=605796
Score = 125 bits (138), Expect = 7e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || || || || ||||| |||||||||||| | | |||| |
Sbjct 306293 AGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGG 306234
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct 306233 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCC 306174
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || ||||| ||| | ||||||||||| || || ||||| ||
Sbjct 306173 TTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTG 306114
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712
||||| || || || | || || || || |||||||
Sbjct 306113 ATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306077
>seq120
Length=764448
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | ||| | ||| ||||| || ||||| ||||||||||| ||| |
Sbjct 228518 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228577
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || |||||||| ||||| || || || | ||| || || || || ||
Sbjct 228578 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228637
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| ||||| || ||||| || ||||| ||| | ||||| || || || ||
Sbjct 228638 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228697
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || ||||| | || || ||||| ||||||||
Sbjct 228698 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 228744
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | ||| | ||| ||||| || ||||| ||||||||||| ||| |
Sbjct 228290 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228349
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || |||||||| ||||| || || || | ||| || || || || ||
Sbjct 228350 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228409
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| ||||| || ||||| || ||||| ||| | ||||| || || || ||
Sbjct 228410 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228469
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || ||||| | || || ||||| || |||||
Sbjct 228470 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228516
>seq46
Length=591722
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| ||| | ||| ||||| || ||||| || |||||||| || |
Sbjct 538466 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538525
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || |||||||| ||||| || || || | ||| || || || || ||
Sbjct 538526 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 538585
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 538586 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACC 538645
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || || || | || || ||||||||||||||
Sbjct 538646 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 538692
>seq107
Length=347312
Score = 87.8 bits (96), Expect = 2e-12
Identities = 332/517 (64%), Gaps = 13/517 (3%)
Strand=Plus/Plus
Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531
|||| ||||||| || ||| ||| |||| | | ||||| | | | |||||||
Sbjct 17181 ACGACCGCGATTTCGGCTACAATTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGC 17240
Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591
| ||| ||||| | ||| ||||| || |||||||| |||| || || || |
Sbjct 17241 TTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCG 17300
Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651
|||| ||||| | |||||||| || |||| | | ||| | | ||||| |
Sbjct 17301 GCATCCACGGTCACGACATTGAGCGCGTCTTGCAGTCTTACAACCTCATGTCCGAGCGCT 17360
Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCG----CCTCAATTG 7707
| ||||| ||||| ||||| || | || ||| || ||||| || || |
Sbjct 17361 ACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGG----AACGCCTCACCCGCAGCTT 17416
Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTG 7767
|| || ||||| || | || ||| || || || || ||||||||| |||||||
Sbjct 17417 TCGTCCTGTTTCCTGGTCACGATGAAGGATGATTCGATTGAAGGCATTTACGACACGCT- 17475
Query 7768 CGCGAT-TGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGT 7826
| || ||||| || ||||| || ||| || || ||| ||| | | || || |
Sbjct 17476 CAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACAT 17535
Query 7827 GCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCAT 7886
||||| | ||| | ||||| ||| ||||| | | | ||| | | |||||
Sbjct 17536 CCGCGCAACCGGCTCCTACATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCAT 17595
Query 7887 GTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGG 7943
| | || || | ||| ||| ||| ||| | || ||||| || || || ||| ||
Sbjct 17596 GCTCCGTGTCTACAACAACACGGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGG 17655
Query 7944 CGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980
||| || ||||| | |||||||||||||| |||
Sbjct 17656 AGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGAC 17692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396991201960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |