Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq115 107 6e-18
seq82 98.7 3e-15
>seq115
Length=605796
Score = 107 bits (118), Expect = 6e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | || ||||| ||||||||||| || || || || |
Sbjct 306303 ACCACCACGCAGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGC 306244
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| || || ||||| || || || || || || ||||| ||||||||||| || || ||
Sbjct 306243 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 306184
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| ||||| || || || || || | || || || || |||| || || | || ||
Sbjct 306183 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 306124
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736
|| || || | ||||| || || || || || ||||| || ||||
Sbjct 306123 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306077
>seq82
Length=702097
Score = 98.7 bits (108), Expect = 3e-15
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586
|| |||| || || || ||||| ||||| || || || || | || || || ||||| |
Sbjct 522791 GACCAAG-TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCT 522849
Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646
| || || || || |||||||| ||||||||||| || || || || ||||| || || |
Sbjct 522850 CGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTT 522909
Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706
| || || | || || || || |||| || || | || || || || || | ||||
Sbjct 522910 GGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCT 522969
Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGC 140735
| || || || || || ||||| || |||
Sbjct 522970 TGCCCGTAAGAGTCTTGACAAAGATTTGC 522998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515250070634069
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |