Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq107 441 8e-119 seq135 95.1 1e-14 seq111 86.0 7e-12 >seq107 Length=347312 Score = 441 bits (488), Expect = 8e-119 Identities = 782/1135 (69%), Gaps = 4/1135 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| ||||||||||| || ||||| | ||| ||| Sbjct 17270 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGTC 17329 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 || | ||| |||| ||| | || | ||| || ||||| ||||||| || ||| Sbjct 17330 TTGCAGTCTTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTC 17389 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 |||||||| ||| |||||||| | ||| ||||||||| || | ||||||||||| Sbjct 17390 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGAT 17449 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| ||||| ||||| ||||||||| |||||||| |||||||||| |||| Sbjct 17450 TCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 17509 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | | | || ||||| | | || | ||| || |||||| Sbjct 17510 GGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTACATCGCCGGCACGAAC 17569 Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||| ||| |||||||| |||||||| |||| |||||||||||| | ||||| Sbjct 17570 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGCGCGCTACGT 17628 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | |||| || ||| ||| || || | ||||| |||||||||||||| |||||||| Sbjct 17629 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 17688 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||||| || || ||| ||| || || | ||||| | ||| ||| Sbjct 17689 TGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAGGAAGTCCGCGCTCG 17748 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || |||||| || | |||||||| || || ||||||||| || ||| | || Sbjct 17749 TGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGG 17808 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || |||| || | ||||| |||| ||| ||||| | ||| ||||| ||||| | Sbjct 17809 CGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGA 17868 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 |||| | |||| | || |||| | ||||||| |||||| | ||| || Sbjct 17869 GTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATCCCCGC 17928 Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821 | | | ||| || | ||| | ||||||||| || |||| || | |||| Sbjct 17929 GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTCATGCT 17988 Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTC 19881 ||||||||||||||||||| || ||||| || |||||| | || ||||||||||||| Sbjct 17989 CTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGATCAAGTCGTC 18048 Query 19882 CAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCT 19941 ||| |||| || || ||||| ||| || ||||||||| ||||| || || | Sbjct 18049 GAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGCCGTCTGCAACTT 18108 Query 19942 GGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTA 20001 ||| || | |||||| ||| ||||| | | | ||||||| || ||| | Sbjct 18109 GGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAAAAGTTGCA 18168 Query 20002 CGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC 20061 |||||| | ||||||| | || |||| ||| ||||||| || | || || Sbjct 18169 CGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAATTACTATCC 18228 Query 20062 GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGG 20121 | | ||||| || || ||| | |||||||| || |||| ||||| || || || Sbjct 18229 TGTCATCGAGGCGCAGAACTCCAATTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGG 18288 Query 20122 CCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180 || ||||||| |||||| || ||| | | ||||| ||| |||||||| ||| Sbjct 18289 TCTCGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGCAAGC 18347 Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 |||||||| ||||||||| || | |||||||| || || | |||||||| Sbjct 18348 TCAACAAGCAGATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 18402 Score = 430 bits (476), Expect = 1e-115 Identities = 790/1148 (69%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 18393 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 18337 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 18336 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 18278 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || |||||||| | ||| || | ||||||| | || || | Sbjct 18277 GATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTG---CGCCTCGATGACAGGATAGTA 18221 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 || ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 18220 ATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 18161 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 18160 TTTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 18102 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || |||||||| || ||||||| Sbjct 18101 AGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGACGACT 18042 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| || || | |||||| ||||| |||| ||| ||||||||||||| |||| Sbjct 18041 TGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGTCCTTGTAGAGCATGA 17982 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| || ||||| ||| ||| | | | || ||| Sbjct 17981 AGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCGCGGGGA 17922 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 |||||| || |||| |||| || | |||| || ||| | || | Sbjct 17921 TCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCTTCGC 17862 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | ||||| ||| ||| ||||| | || |||| || || | Sbjct 17861 CATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCACTCGCCGGCGG 17802 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||||||||| || || ||||| || || |||||| || || | Sbjct 17801 CCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 17742 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| || ||| || || || || || || | || ||| ||||||| Sbjct 17741 GGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCAAAGACGTCAGCGTGCC 17682 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 17681 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 17622 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | |||||||||||| | || ||||||||||| |||||||||| | | ||||||||| | Sbjct 17621 GCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 17562 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| | || || ||||| | | | ||||| || |||| Sbjct 17561 CGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 17502 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||||||||| ||||| ||||| || ||||| || |||| Sbjct 17501 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 17442 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||| | Sbjct 17441 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 17382 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| | | | ||| || | ||| | || | ||||||| Sbjct 17381 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTAAGACTGCAAGACGCGCT 17322 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 | ||||| |||||||||||||| ||||| ||||||| | || ||| |||||| ||| Sbjct 17321 CAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGT-TCG 17263 Query 79909 CCGACATT 79916 |||| || Sbjct 17262 GCGACCTT 17255 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| |||||||| |||||||| || || |||||| ||||| | ||| Sbjct 19203 GGCGCGCGTGCGCAAGTAGTACATACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 19144 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || | |||||||||||| || ||||| Sbjct 19143 CATCGACGTGAGCTGCGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 19084 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | ||||| || ||||||| || ||||| | | |||||||| | |||||| Sbjct 19083 GTCGATGAAGGCACCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 19024 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 19023 GACGGTCTTGTAGATGGCCTTGAGATC 18997 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || ||||| || || Sbjct 19000 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCG 19059 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 |||||||| || |||| |||||||||||| || |||||||| || | || || ||| Sbjct 19060 GCCGATCGAGGTGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 19119 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| |||| | || ||||| | ||||||||| | || || |||||||| Sbjct 19120 ACGATGGCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGT 19179 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 19180 ATGTACTACTTGCGCACGCGCGCC 19203 >seq135 Length=558922 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 88538 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTAATGCCCGGATTGACCTTC 88597 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 88598 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 88632 >seq111 Length=630077 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| ||||| ||| | || || ||||||||||| || ||||||||||| ||||| Sbjct 393675 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 393734 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||||||||||| || ||||| ||||| || || ||| Sbjct 393735 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 393774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523270987120