Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq136 104 5e-17 >seq136 Length=1817790 Score = 104 bits (114), Expect = 5e-17 Identities = 294/442 (67%), Gaps = 16/442 (4%) Strand=Plus/Plus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | || ||||| Sbjct 1191830 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCAAAT 1191889 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 1191890 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 1191947 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 1191948 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 1192007 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 1192008 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 1192064 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| || ||||| ||||||| |||||| ||||| ||| | Sbjct 1192065 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGAATAGAGCGCACGT 1192124 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| ||||| | | || |||| || ||| Sbjct 1192125 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCG 1192183 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 1192184 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 1192241 Query 282151 CCTCGGCCCGAGTCTTGTTGAA 282172 |||||| |||||||||| Sbjct 1192242 TGTCGGCCTTCTTCTTGTTGAA 1192263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821872120910