Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq46 118 2e-21
>seq46
Length=827519
Score = 118 bits (130), Expect = 2e-21
Identities = 458/715 (64%), Gaps = 11/715 (2%)
Strand=Plus/Minus
Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817
||||| || |||||| ||| ||| || |||| || ||||| | ||||| |
Sbjct 800912 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 800853
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||||||||| ||| || || | || || || ||||||
Sbjct 800852 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 800793
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
| | ||||| ||||||||| | ||||| || || || || || || | |||
Sbjct 800792 GTAGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGAC 800733
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||| |||| | | |||||| | ||| ||| |||| | || || ||| |
Sbjct 800732 ATCGAGCGCGTCTTGCAATCGTACAACCTCATGTCTGAGCGCTACTTCACCCACGCCTCG 800673
Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056
||||| |||||||| ||||| || | || || ||||| ||||| || || | |
Sbjct 800672 CCGACACTCTTCAATGCCGGAACGCCTC-ACCCGCAGCTTTCGTCGTGTTTCCTGGTCAC 800614
Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113
||| | || || || | || ||||| || |||||||| | ||||| ||| ||
Sbjct 800613 GATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCA---AGACGTGCGCGCTCAT 800557
Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173
|| || ||| || || |||||| | | || ||||||||| |||| || || ||
Sbjct 800556 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTA 800497
Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233
|||| || || || || | | || ||||| ||| | || || || |
Sbjct 800496 CATCGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 800437
Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290
|||||| | | | || |||| | || | || || | ||||| || || |
Sbjct 800436 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 800377
Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350
|| |||||||| || | || |||||||||||| | |||||| | ||||| ||
Sbjct 800376 CGAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGA 800317
Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410
| | | || ||||| ||||||| | || ||| | |||| |||| ||| ||
Sbjct 800316 GGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCG 800257
Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465
||| |||||| |||||| ||| | || | | || | || ||||| | ||||
Sbjct 800256 TGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTC 800202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764240051776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |