Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq46 91.5 3e-13 >seq46 Length=827519 Score = 91.5 bits (100), Expect = 3e-13 Identities = 177/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || ||||||||||||| || | ||| || || || || || || Sbjct 800533 CCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCT 800592 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904 ||||| |||||| | | | ||||| ||||| ||||| || ||||| | | || Sbjct 800593 TCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGC-GT 800651 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || ||||| || || || ||||| || ||| || |||||||| | || Sbjct 800652 TCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTA 800711 Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 | || | ||| | |||||| ||| || || ||||| || || |||||||| | || Sbjct 800712 CGATTGCAAGACGCGCTCGATGTCGTGA-CCATGGATGCCAACGGCGACACGCATGAGCA 800770 Query 95024 TGTCCTGAGGGCGCTC 95039 ||| ||| ||||| || Sbjct 800771 TGTGCTGCGGGCGTTC 800786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582009389935