Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq46 91.5 3e-13
>seq46
Length=827519
Score = 91.5 bits (100), Expect = 3e-13
Identities = 177/256 (69%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || || ||||||||||||| || | ||| || || || || || ||
Sbjct 800533 CCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCT 800592
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904
||||| |||||| | | | ||||| ||||| ||||| || ||||| | | ||
Sbjct 800593 TCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGC-GT 800651
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| || || || ||||| || ||| || |||||||| | ||
Sbjct 800652 TCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTA 800711
Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023
| || | ||| | |||||| ||| || || ||||| || || |||||||| | ||
Sbjct 800712 CGATTGCAAGACGCGCTCGATGTCGTGA-CCATGGATGCCAACGGCGACACGCATGAGCA 800770
Query 95024 TGTCCTGAGGGCGCTC 95039
||| ||| ||||| ||
Sbjct 800771 TGTGCTGCGGGCGTTC 800786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582009389935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |