Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq46 123 3e-23 >seq46 Length=827519 Score = 123 bits (136), Expect = 3e-23 Identities = 419/647 (65%), Gaps = 12/647 (2%) Strand=Plus/Plus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 |||||| ||| | ||| || || | |||||| ||||| |||||||| || || | || Sbjct 800235 CCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAA 800294 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 800295 GAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCGAA 800354 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | |||| ||||| || || | ||| || || | |||| || || ||||| || || Sbjct 800355 GACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 800414 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | ||| | |||||||| || || || | | ||| || | || ||||| || Sbjct 800415 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 800474 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 || || || || | ||| ||| || | || || || || || | ||| Sbjct 800475 GTAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 800534 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCCTT 63606 || || || || | || ||||| | ||||| ||| || | |||||| |||||||||| Sbjct 800535 GATACCACCGGCGGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 800593 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | || |||||| |||| | | || ||||| || | || | ||| |||| Sbjct 800594 CAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTC 800653 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | ||||| || | || || || ||||| || || | ||||| | || ||||||| Sbjct 800654 CGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTACG 800713 Query 63727 -TCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAA 63781 | ||| | | || || || |||| |||| || || ||||||||||| | Sbjct 800714 ATTGCAAGA-CGCGCTCGATGTCGTGACCATGGATG----CCAACGGCGACACGCATGAG 800768 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 ||||||||| || | ||| | | ||| || || | ||||||||| || | Sbjct 800769 CATGTGCTGCGGGCGTTCGGCTACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAG 800828 Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888 ||||| || ||||| |||||||| || || || ||||| |||| Sbjct 800829 CGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 800875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816363982960