Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq46 244 3e-59
>seq46
Length=827519
Score = 244 bits (270), Expect = 3e-59
Identities = 583/872 (67%), Gaps = 16/872 (2%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|||||||||||||| ||| | |||||||| || |||| |||||| | | || | ||
Sbjct 800786 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAG 800727
Query 363508 GCCGCGA-TTGAAA-CATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACG 363561
|||| ||| || | || || || ||| || ||| | |||| |||||| ||
Sbjct 800726 --CGCGTCTTGCAATCGTACAACCTCATGTCTGAGCGCTACT----TCACCCACGCCTCG 800673
Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621
|| ||| | | |||||| ||||| | | | || ||| | || || || || || | |
Sbjct 800672 CCGACACTCTTCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACG 800613
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
|||||||| ||||| || || || |||| ||||| || |||| || || || || |||
Sbjct 800612 ATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCC 800553
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740
|||| || || || || ||| | |||||||| | || || || | | |||||
Sbjct 800552 AAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG-CTCCTACAT 800494
Query 363741 TCGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799
||||| ||| || |||||||| || | || |||||||| ||||| | |||| |
Sbjct 800493 -CGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACA 800435
Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859
| ||| | ||||||||||| ||||| ||||| || || || || || || ||||
Sbjct 800434 CCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCG 800375
Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919
|||| || || || | || ||||| || || || || || ||| || || ||||
Sbjct 800374 AGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGG 800315
Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979
|| | || || |||||||| |||| ||| || ||| || | || | |||||| |||| |
Sbjct 800314 AAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTG 800255
Query 363980 TGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039
| ||||| | | ||| | ||||| ||||| ||| || || || ||| |
Sbjct 800254 TCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAG 800195
Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099
| | || || || | || | | |||||| || ||| |||||| || |
Sbjct 800194 TCTATGGCGAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGA 800135
Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159
|||| || ||||| || || || |||| || || | || | ||| | || || || |
Sbjct 800134 AGACGATCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCA 800075
Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219
|||| ||| | |||||||| | ||| || || ||||| || ||||||| |
Sbjct 800074 ACCCCTTCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCA 800015
Query 364220 CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
| || || | ||||| || |||||||| || || ||| | || || |||||| |
Sbjct 800014 CGATCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCG 799955
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311
|||| || ||| | || ||||||||| | |||
Sbjct 799954 CCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 799923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350978222774
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |