Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq136 93.3 9e-14
seq89 87.8 4e-12
>seq136
Length=1817790
Score = 93.3 bits (102), Expect = 9e-14
Identities = 190/277 (69%), Gaps = 4/277 (1%)
Strand=Plus/Minus
Query 217837 TGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCC 217896
||||| |||||| |||| || ||||| || || |||| || | | ||||| ||
Sbjct 1192851 TGCACGCTCATCTTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCT 1192792
Query 217897 GTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGC 217956
|| || ||||| || | |||||| ||||||| | || || ||| |||||||||||||
Sbjct 1192791 GTCGTCGGTCGAGACAACTATGGTGTCTTCCCTTTGCGAGGAAAGTTGCTCAACGTGCGT 1192732
Query 217957 GATGCCTCGGTTTCAAGCATTGCT-GCAAATGCAGAGATTGCCGCCATCAAGCAAATCCT 218015
|| || ||| |||| | || | ||||| |||||| || |||||||| ||| |
Sbjct 1192731 GAAGCGGCGG-GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATCAAGCAGATCTT 1192673
Query 218016 GGGTCTTCAGGTTGGAAAGACTTACAAGGATG-CGTCATCTCTGCGTTATGGCTCTGTCA 218074
|||||| ||| || || ||||| || | || | || || ||||| ||| |||
Sbjct 1192672 GGGTCTGCAGCAGGGCAAAGTTTACACCGACGTCGAC-TCGCTCCGTTACGGCAAGCTCA 1192614
Query 218075 TGCTTATGACTGATGCTGATGTTGACGGGTCCCACAT 218111
|| | ||| | ||| ||| || || || |||||
Sbjct 1192613 TGATCATGGCCGATCAAGATCACGATGGATCGCACAT 1192577
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| ||||||||||||||| ||||| | ||||||||||| || |||| ||||||||||
Sbjct 1065609 GCCTGGTTAGCTCAGTCGGCAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAGC 1065550
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 1065549 CCCGCATCGGGC 1065538
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| ||||||||||||||| ||||| | ||||||||||| || |||| ||||||||||
Sbjct 1071091 GCCTGGTTAGCTCAGTCGGCAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAGC 1071150
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 1071151 CCCGCATCGGGC 1071162
Score = 86.0 bits (94), Expect = 1e-11
Identities = 247/380 (65%), Gaps = 0/380 (0%)
Strand=Plus/Minus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
|| |||||| |||||||| | || || |||||| | || | ||| |||||||||
Sbjct 1192167 GATTTCATCAACAAGGAGTTGATCCTCTTCTCGATGGCCGACAACGTGCGCTCTATTCCC 1192108
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637
|| | ||||| |||| || || || ||| || | || | ||||||||
Sbjct 1192107 TCTGTCATTGATGGGTTCAAACCGGGTCAACGCAAGGTCTTGTTCGGTTGCTTCAAGCGC 1192048
Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697
|| || || || || ||||||| || || ||||| || |||| || |
Sbjct 1192047 AAGTTGACGCAGGAGATCAAGGTCGGACAATTGGGCGGTTACGTCGCCGAGCACTCGGCG 1191988
Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757
|||||||||||||| |||| |||| || |||| | ||| |||| || | | ||
Sbjct 1191987 TACCATCACGGTGAAATGAGTTTGCAAGGCACCATCATCGGCCTGGCGCAACAGTTCGTC 1191928
Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGT 218817
|| |||||| | ||| | || ||| |||||||| |||||| | ||||| |||
Sbjct 1191927 GGGTCCAACAACCTCAACATTCTCGACCCGAACGGTCAATTTGGTACGCGTCTGCAAGGT 1191868
Query 218818 GGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAG 218877
|| || || ||||| || | || ||||| || || | || || | |||||
Sbjct 1191867 GGTAAAGACGCGGCTTCGGCTCGTTACATCTTCACGAACGTATCATCCATCACGCGTAGC 1191808
Query 218878 GTGTTCAATCAGGCCGATGA 218897
|| ||| ||| || |||||
Sbjct 1191807 GTCTTCCATCCCGCTGATGA 1191788
>seq89
Length=1640423
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 1153903 GGATCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 1153962
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 1153963 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 1154022
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | ||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 1154023 CTCGAGAATTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 1154082
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 1154083 GGCTTCCT 1154090
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 1160176 GGATCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 1160117
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 1160116 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 1160057
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | ||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 1160056 CTCGAGAATTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 1159997
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 1159996 GGCTTCCT 1159989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834732442037
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |