Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq136 89.7 1e-12 >seq136 Length=1817790 Score = 89.7 bits (98), Expect = 1e-12 Identities = 710/1115 (64%), Gaps = 64/1115 (6%) Strand=Plus/Plus Query 297464 TCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGG--CAACAACCAGTTGATGT 297521 || |||||||| |||| | || ||| || || || | ||| | | || ||||| || Sbjct 1191860 TCTTTACCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAAT--GTTGAGGT 1191917 Query 297522 TATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGC 297581 | ||| ||||| | | || || ||| | |||||| ||||||| | ||| | Sbjct 1191918 TGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCAC 1191977 Query 297582 CATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGG 297641 | || || || || ||||| || |||||||||| || ||| | ||||| | || Sbjct 1191978 CGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCT 1192037 Query 297642 TCGTCAAATTGCGCTTGAA--AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 297699 |||||| ||||||||||| | | || | | || || |||||| |||||||| || Sbjct 1192038 GCGTCAACTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGTTTGAACCC 1192095 Query 297700 ATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTT 297759 ||||| ||| || ||||| || | ||| | |||||| | || | ||||| Sbjct 1192096 ATCAATGACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTT 1192155 Query 297760 GTCGATGAAGT-CGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTT 297818 || |||||| | | || |||| || |||| | ||||||| || | | || || Sbjct 1192156 GTTGATGAAATCCTCGATCGGG-ACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGA 1192214 Query 297819 CGTATGCCGTC--ATCCACTCCTTGCGATCCTCGGC--TCGTGACTTGTTGAA----AGA 297870 || | ||| || | ||| |||||||| | ||||| || | ||||||||| | Sbjct 1192215 CG-AAGCC-TCGGAGCCATTCCTTGCGGTTGTCGGCCTTCTT--CTTGTTGAAGGCCATG 1192270 Query 297871 ACGGTCAAT--GAGCTC-TCCGGAATCGGAAGTCCACATAAACGTCTTCATGAGAGACTT 297927 || ||||| | |||| ||| | ||| | | | |||| || | || ||| Sbjct 1192271 TCGATCAATTCGCGCTCTTCCTGCGTCGAAGGGC----GGAACG---GCAAGCGATGCTT 1192323 Query 297928 ---CAGATTGCTGAAGTATTTTTTGGCATCTGCACTGG---AACTCGTACCAAGCCCCTT 297981 || |||| ||||| || || | | |||| ||||||||| | ||||| Sbjct 1192324 GTCCATGTTGCCAAAGTACTTAACCGCGT---CCCTGGCGTCACTCGTACCCAATCCCTT 1192380 Query 297982 AAAATACTTG----GTCGTCCATTTCTTCAT-ATCTTGTGTCTT-CACGAAGTCTTCGAA 298035 || |||||| | | |||| | ||| ||| || |||| | | | ||| | Sbjct 1192381 GAAGTACTTGATGCGCCATCCACGAC--CATCATC-GGTCTCTTCCTTCCATTGCTCGTA 1192437 Query 298036 GTCAGGAAGACTGAAAAATTCTCTGACTTCT--TTTCCCTTCCTGGCAACTACGATAGGC 298093 | ||||| |||||||| ||| || || ||||| | || ||||| || Sbjct 1192438 CTGAGGAATTGTGAAAAAT--GACAACTCCTTGTTCCCCTTGGTCGCCTTGACGATGGGG 1192495 Query 298094 GTGATGAACTTCTTCAAGAA-CCCTGGAATTTCTAGAAGATTAGGGAAACAGCTATGGAA 298152 ||||| |||| |||||| |||| | || || | |||||| ||| || || Sbjct 1192496 GTGATAAACTCGAGCAAGAAGCCCTTCAGCTT-GAGCAACGAAGGGAACCAGTAATCGAG 1192554 Query 298153 AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCAT 298212 ||||| |||| ||||| ||||| | ||| || ||| |||| ||||||||| Sbjct 1192555 GAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCAT 1192614 Query 298213 CACATGACCGTAACGAAGCGAG--GACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCG 298270 | | |||||||| |||||| ||| ||| |||| ||||| || || || || Sbjct 1192615 GAGCTTGCCGTAACGGAGCGAGTCGAC--GTCGGTGTAAACTTTGCCCTGCTGCAGACCC 1192672 Query 298271 AGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA-TGCTTGCCACGGATGCATC 298329 | || || |||| |||| || || | || | || |||| | | | || || Sbjct 1192673 AAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGC-CCGCCGCTTC 1192731 Query 298330 GCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCGACCAC 298389 || || || | | ||||| || | |||||| || ||||| | || |||||||| || Sbjct 1192732 ACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGAC 1192791 Query 298390 GGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 298449 | ||| || | || || || | | |||||||| || || |||| ||||| ||||| Sbjct 1192792 AGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCA 1192851 Query 298450 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGAATTCCAGTCAC 298509 | | | ||| |||| ||||| | ||||| | ||| ||| | || || | Sbjct 1192852 CTTGGACCCGTTCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTGACGAGACCCGTGAT 1192911 Query 298510 TCG-GATCTTCTTGGTACCGTCGGTCTTCTTCAGC 298543 || |||| |||| ||||| |||||||| ||| Sbjct 1192912 ACGCGATC-GCTTGTGTCCGTCCGTCTTCTTGAGC 1192945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877781487950