Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq46 250 2e-61 >seq46 Length=827519 Score = 250 bits (276), Expect = 2e-61 Identities = 735/1125 (65%), Gaps = 27/1125 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| ||||||||| || ||| || ||| | || || || |||| | Sbjct 800852 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 800793 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| | || || || || |||||| Sbjct 800792 GTAGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGAC 800733 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894 || | || |||| | | || |||| || | | || ||| ||| Sbjct 800732 ATCGAGCGCGTCTTGCAATCGTACAACCTCATGTCTGA---GCGCTACTTCACCCACGCC 800676 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || ||||| || || || || || ||| | || |||||||||||| | Sbjct 800675 TCGCCGACACTCTTCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTC 800616 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || || || || | ||||| |||||| || ||| |||| Sbjct 800615 ACGATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 800556 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 800555 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 800496 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| || || || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 800495 ATCGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 800436 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 800435 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 800376 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||| ||||| || Sbjct 800375 GAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAG 800316 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || |||||| | || Sbjct 800315 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGT 800256 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| || || || ||| |||| ||||| || ||| Sbjct 800255 GTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAA 800196 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | ||| | ||| | | ||||| | |||||| | ||||| |||| Sbjct 800195 GTCTATGGCGAAGAGTTCCG-CGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAA 800137 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || || || ||| | ||| | || | ||||| || || || Sbjct 800136 GAAGACGATCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGG 800077 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | ||| ||| | | ||| || || ||||| || |||| || Sbjct 800076 CAACCCCTTCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGG 800017 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||||||| ||||| |||||||||||||| ||||||| | | ||||||||| Sbjct 800016 CACGATCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTG 799957 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 || || || ||| ||| ||| ||| || | | ||| | | ||| || || Sbjct 799956 CGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGC 799903 Query 94673 CTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 ||| ||| | | | || | ||| | || || ||| | | || ||| Sbjct 799902 TTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAAC 799854 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| | Sbjct 799853 TTGAACCGCATCATCGACGTTAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTTC 799794 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| |||||| Sbjct 799793 CGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGCG 799749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722229105720