Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq46 105 1e-17
>seq46
Length=827519
Score = 105 bits (116), Expect = 1e-17
Identities = 132/176 (75%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 203888 TAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTT-T 203946
||||||||||| ||||| || || || ||| ||||| | |||||| || | ||||
Sbjct 798853 TAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGC 798912
Query 203947 GCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGC 204006
|| ||||||| || | || ||| ||||| || || || ||||||||| |||||||
Sbjct 798913 GCCATCGTTGGGCTC-GACAAGTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCGC 798970
Query 204007 C-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
| ||||| || | || || |||||| ||||| ||||| | |||||| || ||||||
Sbjct 798971 CTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 799026
Score = 87.8 bits (96), Expect = 3e-12
Identities = 284/433 (66%), Gaps = 6/433 (1%)
Strand=Plus/Plus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||||||||| ||| ||||| || | | || |||||||| || | | | | ||
Sbjct 800259 CTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 800318
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283
| ||| ||||||| | |||||| || || | | ||| |||||||| ||||| |
Sbjct 800319 CTTGCCATGGTTCTTGCGAAGGTCCAG-GAACTCGAAGACGTCAGCGTGCCATGGCTCGA 800377
Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343
| | || | || || || | |||||| ||||| ||||| || ||| | |
Sbjct 800378 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 800437
Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403
|||| | || || ||||| || || | ||||| | | |||||||||| ||||
Sbjct 800438 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCCGCGATGT 800497
Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463
||||| || | | |||| |||| | || || || || | ||||| ||
Sbjct 800498 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 800557
Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522
| | |||||| ||||| || ||| |||||||||| | || ||||| ||| || ||
Sbjct 800558 TGAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCAATCGAATCATCCTTCATCGTG 800616
Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581
||||| | ||||| | |||| || || || || || | |||||| || ||
Sbjct 800617 ACCAGGAAACACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCATTGAAGAGTGTCGGCGA 800675
Query 205582 GGCGTGGCTGAAG 205594
||||||| |||||
Sbjct 800676 GGCGTGGGTGAAG 800688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153639507920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |