Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq94 185 9e-42 seq63 145 8e-30 seq136 140 3e-28 seq86 122 9e-23 >seq94 Length=1157722 Score = 185 bits (204), Expect = 9e-42 Identities = 175/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||||||||| ||||| ||||| || |||||| | ||| || || || ||| ||||| Sbjct 235565 GATTTGAAAACCGTAGAAGCATCGAGCCTCGGCTGACTGGACCTCACCAGAGAATCGCTC 235506 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| || |||||||||||||||||| ||||||||||||||| || |||||| ||| Sbjct 235505 GACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 235446 Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| | | | | | ||||||||| || | |||||||||| ||| Sbjct 235445 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATATCCTTGGACAAGTC 235386 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| |||||||||| || ||||||||||| |||||| Sbjct 235385 CATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCTTTCTTGTAC 235343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||||| | ||||||||||||| || | ||||||||| | || ||||| |||||| Sbjct 236168 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 236109 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 || ||||| |||||||| | ||| || || |||||||| || |||| ||||| Sbjct 236108 AAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 236055 >seq63 Length=1462319 Score = 145 bits (160), Expect = 8e-30 Identities = 165/218 (76%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| |||||||| || |||||| |||| |||||| | | Sbjct 870633 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870692 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || || | ||||| || || |||||| | |||| Sbjct 870693 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870750 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | || ||||| ||||| || || | ||||| ||| ||| |||| Sbjct 870751 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870810 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| ||||||| || |||||||||||| Sbjct 870811 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGT 870848 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 625107 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625166 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || ||||| |||||| | ||||| Sbjct 625167 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625225 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||||||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 625226 ACAACGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625285 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| |||||||| ||| | |||| || Sbjct 625286 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625333 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 625335 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625394 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || ||||| |||||| | ||||| Sbjct 625395 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625453 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || ||||||||||| || || | ||||| ||| ||| ||||| Sbjct 625454 ACAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625513 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| |||||||| ||| | |||| || Sbjct 625514 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625561 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 625563 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625622 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || ||||| |||||| | ||||| Sbjct 625623 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625681 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || ||||||||||| || || | ||||| ||| ||| ||||| Sbjct 625682 ACAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625741 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| |||||||| ||| | |||| || Sbjct 625742 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625789 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| | | Sbjct 625791 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 625850 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 625851 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 625909 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 625910 ACAACGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 625969 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| ||||||| || |||||||| ||| | ||||||| Sbjct 625970 CATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGTCTCCGAGGCGG 626017 Score = 136 bits (150), Expect = 4e-27 Identities = 163/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| || |||||| |||| |||||| | | Sbjct 870177 ATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870236 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || || | ||||| || || |||||| | |||| Sbjct 870237 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870294 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | || ||||| ||||| || || | ||||| ||| ||| |||| Sbjct 870295 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870354 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| ||||||| || |||||| ||||| Sbjct 870355 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 870392 Score = 136 bits (150), Expect = 4e-27 Identities = 163/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| || |||||| |||| |||||| | | Sbjct 870405 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870464 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || || | ||||| || || |||||| | |||| Sbjct 870465 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870522 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | || ||||| ||||| || || | ||||| ||| ||| |||| Sbjct 870523 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870582 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| ||||||| || |||||| ||||| Sbjct 870583 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 870620 >seq136 Length=1817790 Score = 140 bits (154), Expect = 3e-28 Identities = 171/228 (75%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| || || || || ||||||||||| ||||||||| |||| |||||| | ||| Sbjct 239097 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 239038 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 ||| || | | | | |||| || |||| ||||| || || || |||||| ||||| Sbjct 239037 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCA 238980 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | || ||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 238979 GCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAA 238920 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| |||| || || |||||||| ||| || | || || Sbjct 238919 CATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 238872 Score = 129 bits (142), Expect = 6e-25 Identities = 164/225 (73%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||| ||||| || |||||||||| ||||||| | | |||||| || | ||| | ||| Sbjct 1454650 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCGCTCGAGAACCTCTC 1454591 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||||||| || || |||| || || |||||||| ||||| |||||||| ||| Sbjct 1454590 GACCAGATTCTCATTCACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 1454531 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 || | ||| |||| || ||| | | | | ||||||| | ||| ||| ||||| Sbjct 1454530 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 1454471 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||| ||| ||| |||||| ||||| | ||||| ||||||||| Sbjct 1454470 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACAT 1454426 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||||| | | || || ||| ||| | || ||||| | ||| ||||| Sbjct 1455231 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 1455172 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 |||||| ||||| || ||| ||||||||||| ||||||||||||||||| |||| ||| Sbjct 1455171 CTCGTTGGAGAAAGACAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAAGATGGAGGC 1455112 Query 132996 GAA 132998 ||| Sbjct 1455111 GAA 1455109 >seq86 Length=231977 Score = 122 bits (134), Expect = 9e-23 Identities = 167/228 (73%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| || || || || || |||||||| || |||||| |||| |||||| | |||| Sbjct 67223 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 67164 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363 || || | | | | |||| || |||| ||||| || || || |||||| ||||| Sbjct 67163 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 67106 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || ||||| ||||| || || | ||||| ||| ||| |||||| Sbjct 67105 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAAC 67046 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| |||| || || ||||| || || | |||| ||| Sbjct 67045 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGC 66998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171818410880