Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq94 185 9e-42
seq63 145 8e-30
seq136 140 3e-28
seq86 122 9e-23
>seq94
Length=1157722
Score = 185 bits (204), Expect = 9e-42
Identities = 175/223 (78%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||||||||| ||||| ||||| || |||||| | ||| || || || ||| |||||
Sbjct 235565 GATTTGAAAACCGTAGAAGCATCGAGCCTCGGCTGACTGGACCTCACCAGAGAATCGCTC 235506
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||| || |||||||||||||||||| ||||||||||||||| || |||||| |||
Sbjct 235505 GACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 235446
Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| | |||||||| | | | | | ||||||||| || | |||||||||| |||
Sbjct 235445 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATATCCTTGGACAAGTC 235386
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437
|| ||| ||| |||||||||| || ||||||||||| ||||||
Sbjct 235385 CATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCTTTCTTGTAC 235343
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| | ||||||||||||| || | ||||||||| | || ||||| ||||||
Sbjct 236168 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 236109
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998
|| ||||| |||||||| | ||| || || |||||||| || |||| |||||
Sbjct 236108 AAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 236055
>seq63
Length=1462319
Score = 145 bits (160), Expect = 8e-30
Identities = 165/218 (76%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||| |||||||| || |||||| |||| |||||| | |
Sbjct 870633 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870692
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 870693 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870750
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||||| || || | ||||| ||| ||| ||||
Sbjct 870751 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870810
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || ||||||||||||
Sbjct 870811 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGT 870848
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 625107 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625166
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | |||||
Sbjct 625167 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625225
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||||||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 625226 ACAACGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625285
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 625286 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625333
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 625335 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625394
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | |||||
Sbjct 625395 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625453
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || ||||||||||| || || | ||||| ||| ||| |||||
Sbjct 625454 ACAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625513
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 625514 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625561
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 625563 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625622
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | |||||
Sbjct 625623 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625681
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || ||||||||||| || || | ||||| ||| ||| |||||
Sbjct 625682 ACAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625741
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 625742 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625789
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| | |
Sbjct 625791 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 625850
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 625851 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 625909
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 625910 ACAACGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 625969
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| ||||||| || |||||||| ||| | |||||||
Sbjct 625970 CATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGTCTCCGAGGCGG 626017
Score = 136 bits (150), Expect = 4e-27
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| |||||||| || |||||| |||| |||||| | |
Sbjct 870177 ATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870236
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 870237 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870294
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||||| || || | ||||| ||| ||| ||||
Sbjct 870295 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870354
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || |||||| |||||
Sbjct 870355 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 870392
Score = 136 bits (150), Expect = 4e-27
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| |||||||| || |||||| |||| |||||| | |
Sbjct 870405 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870464
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 870465 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870522
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||||| || || | ||||| ||| ||| ||||
Sbjct 870523 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870582
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || |||||| |||||
Sbjct 870583 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 870620
>seq136
Length=1817790
Score = 140 bits (154), Expect = 3e-28
Identities = 171/228 (75%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || ||||||||||| ||||||||| |||| |||||| | |||
Sbjct 239097 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 239038
Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
||| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 239037 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCA 238980
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | || ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 238979 GCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAA 238920
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| |||| || || |||||||| ||| || | || ||
Sbjct 238919 CATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 238872
Score = 129 bits (142), Expect = 6e-25
Identities = 164/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||| ||||| || |||||||||| ||||||| | | |||||| || | ||| | |||
Sbjct 1454650 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCGCTCGAGAACCTCTC 1454591
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||||||| || || |||| || || |||||||| ||||| |||||||| |||
Sbjct 1454590 GACCAGATTCTCATTCACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 1454531
Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
|| | ||| |||| || ||| | | | | ||||||| | ||| ||| |||||
Sbjct 1454530 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 1454471
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||| ||| ||| |||||| ||||| | ||||| |||||||||
Sbjct 1454470 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACAT 1454426
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| |||||| | | || || ||| ||| | || ||||| | ||| |||||
Sbjct 1455231 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 1455172
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||||| || ||| ||||||||||| ||||||||||||||||| |||| |||
Sbjct 1455171 CTCGTTGGAGAAAGACAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAAGATGGAGGC 1455112
Query 132996 GAA 132998
|||
Sbjct 1455111 GAA 1455109
>seq86
Length=231977
Score = 122 bits (134), Expect = 9e-23
Identities = 167/228 (73%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
|||||| || || || || || |||||||| || |||||| |||| |||||| | ||||
Sbjct 67223 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 67164
Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363
|| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 67163 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 67106
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || ||||| ||||| || || | ||||| ||| ||| ||||||
Sbjct 67105 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAAC 67046
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||| |||| || || ||||| || || | |||| |||
Sbjct 67045 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGC 66998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171818410880
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