Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq116 152 6e-32
seq46 152 6e-32
seq136 140 4e-28
seq94 104 3e-17
>seq116
Length=1878684
Score = 152 bits (168), Expect = 6e-32
Identities = 274/395 (69%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| || ||||| ||| | || |||
Sbjct 51068 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 51127
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 51128 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 51187
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| ||||| ||| || ||| ||| ||| | |||||
Sbjct 51188 GATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAA 51247
Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 13829
||| || || ||| | || ||| ||| |||||| || | |||||| | |||| | | ||
Sbjct 51248 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATCTCCCGA-GCTGTC 51305
Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889
| ||| | ||| || |||| | | | | | || || || | || || |
Sbjct 51306 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 51365
Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949
|||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 51366 GATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACC 51425
Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
||||||| | ||| | || ||||||||||||||
Sbjct 51426 CCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 51460
>seq46
Length=827519
Score = 152 bits (168), Expect = 6e-32
Identities = 523/807 (65%), Gaps = 19/807 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| ||||| ||||||| ||||| | || |||||||| | || || || ||
Sbjct 800781 CCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAGCGCGT 800722
Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729
||| | | ||| || ||||| | | || |||| |||||| | || || ||||
Sbjct 800721 CTTGCAATCGTACAACCTCATGTCTGAGCGCTAC-TTCACCCACGCCTCGCCGACACTCT 800663
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
|||| || || || || || || | || |||||||| | | | ||||| |
Sbjct 800662 TCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACGATGAAGGATG 800603
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
|||| || | ||||| |||| ||| |||| || || | ||||| ||| || |
Sbjct 800602 ATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCG 800543
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGAGGT-AC 111907
|||||||||| || |||||| | || | || | | | ||| || | | || ||
Sbjct 800542 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACC--GGCTCCTACATCGCGGGCAC 800485
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || | || | || || | || ||||| || || | ||| ||| ||||||||
Sbjct 800484 GAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTA 800425
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
|| |||||| ||| ||||| | ||| | |||| |||| || ||||||||
Sbjct 800424 CGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATG 800368
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | |||||||| || | || ||||| || | ||||| | ||
Sbjct 800367 GCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGGAAGTCCG 800308
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | || |||||||||| || ||||||||||| ||||| || ||| || | || |||
Sbjct 800307 CGCT--CGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAG 800250
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
| ||| | ||| | ||||| || || | | || ||||| ||| ||| | |
Sbjct 800249 GCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTAT 800190
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259
|| || ||||| ||| | | | ||| ||||| | || | || || | ||||
Sbjct 800189 GGCGAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGAAGACG 800130
Query 112260 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319
| || || | | ||| | || ||||| | | || ||| ||||| | ||
Sbjct 800129 ATCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCC 800070
Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379
| ||||| |||||||||||| ||| |||| || |||||||| | || ||||
Sbjct 800069 TTCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCACGATC 800010
Query 112380 AAGAGTTCCAACCTCTGTACAGAAATC 112406
||| || ||||| || || || |||
Sbjct 800009 AAGTCGTCGAACCTGTGCACCGAGATC 799983
>seq136
Length=1817790
Score = 140 bits (154), Expect = 4e-28
Identities = 238/337 (71%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 1192559 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 1192618
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || || | || ||||| || ||||||||||||
Sbjct 1192619 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATC 1192678
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCACGA 176899
| ||||| ||| ||||| ||| || ||| | | || | || | | || |||||
Sbjct 1192679 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 1192735
Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959
|| || |||| || || | |||||||||||| |||| || ||||| || ||||
Sbjct 1192736 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 1192795
Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019
||||||| || ||||||| || || ||||| || || |||| |||||| || ||||||
Sbjct 1192796 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 1192855
Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054
|| | | | |||||| || ||||||||||| ||
Sbjct 1192856 GACCCGTTCCT--CGTACCAGCGTTGTTCGCATCTTC 1192890
>seq94
Length=1157722
Score = 104 bits (114), Expect = 3e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 419400 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 419459
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 419460 CGAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 419519
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| |||||||||||
Sbjct 419520 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 419579
Query 13772 CCATGAATCACC 13783
||| || || ||
Sbjct 419580 CCACGAGTCCCC 419591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741181793040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |