Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq46 131 2e-25 >seq46 Length=827519 Score = 131 bits (144), Expect = 2e-25 Identities = 427/657 (65%), Gaps = 6/657 (1%) Strand=Plus/Plus Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTA 110433 ||||| ||||| || |||||||| ||| || || || ||||||||| | ||| | Sbjct 800017 CCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCGGCGTCTTTGTAGAGCATGAAGGGGTTG 800076 Query 110434 CCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCG 110493 |||||||| ||| | | ||||| || | ||| | | ||||||| || Sbjct 800077 CCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTTGCGCGGGGATCGTCTTC 800136 Query 110494 TTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA 110553 || ||| | || |||| ||||| || | ||||| | || || | || || || Sbjct 800137 TTGGCGCGGCCCTCCTTTTCGTATTTTTCGAACAAGGCGCGGAACTCTTCGCCATAGACT 800196 Query 110554 TCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACC 110613 || || || || | |||| |||||||||| ||| | || | |||| || Sbjct 800197 TCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACA 800256 Query 110614 CTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCT 110673 | || ||| ||||| || |||||||| | ||| |||| || ||||| || | || Sbjct 800257 CGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCC 800316 Query 110674 TCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCG 110733 || | || ||||| ||| || |||| || || | || || | ||||||||| ||| Sbjct 800317 TCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCATGGCTCG 800376 Query 110734 AGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCT-GGTTAACATAGCGTGCTGTG 110790 || |||| |||| || ||| ||| || ||| ||| || ||||| || ||| Sbjct 800377 AGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTG 800436 Query 110791 GCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT 110850 ||| |||| | |||||| || | || || | || | || || || ||| || Sbjct 800437 TTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCCGCGATG 800496 Query 110851 CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTA 110910 ||| | || || |||| |||||| || ||| |||||||| || ||| Sbjct 800497 TAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAG 800556 Query 110911 ATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGC 110969 || | || ||| ||| |||| || | || || || ||||||||||| |||| | | Sbjct 800557 ATGAGCGCGCACGTCT-TGAGCGTGTCGTAGATGCCTTCAATCGAATCATCCTTCATCGT 800615 Query 110970 AATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | || || || || || | ||| || |||||||||| |||||||||||||| || Sbjct 800616 GACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCATTGAAGAGTGTCGG 800672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974844134600