Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq46 141 1e-28 seq116 129 7e-25 seq94 109 7e-19 seq136 87.8 2e-12 >seq46 Length=827519 Score = 141 bits (156), Expect = 1e-28 Identities = 548/857 (64%), Gaps = 13/857 (2%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| ||||| | |||||||| || | ||||| || || Sbjct 800781 CCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAGCGCGT 800722 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 |||| | | ||| || ||||| | | |||| ||||| | || || ||||| Sbjct 800721 CTTGCAATCGTACAACCTCATGTCTGAGCGCTACTTCACCCACGCCTCGCCGACACTCTT 800662 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || || || |||||| | || || ||||| || | | ||||| || Sbjct 800661 CAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACGATGAAGGATGA 800602 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 800601 TTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 800542 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 ||||| || || |||||| | | | || | ||| || ||| ||| || Sbjct 800541 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCGGGCACG 800484 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | || || | || ||||| || || | ||| ||| |||||||| Sbjct 800483 AACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 800424 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | |||| || ||||| | || || ||||| ||||| | || |||||| Sbjct 800423 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGG 800367 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || || || || | |||||||| || | || ||||| || | || || | || Sbjct 800366 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGGAAGTCCGC 800307 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | |||||||| | | || |||||||| || || || ||| |||| || |||| Sbjct 800306 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCC 800247 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 | || | ||| | || ||||| || | | || || || ||| ||| | || Sbjct 800246 GCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGC 800187 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || ||||| ||| | | | ||| || ||| ||||||| | ||||| ||| | Sbjct 800186 GAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATC 800127 Query 75863 CCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 || || | ||||| | || ||||| || | ||| || ||||| | || | Sbjct 800126 CCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCCTTC 800067 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| ||||| || || ||||| || ||||||||||| | || || |||||| Sbjct 800066 ATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAG 800007 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || || || ||||| || || | |||||| | | ||| ||| || || ||| Sbjct 800006 TCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGC 799947 Query 76043 AATTTGGCATCAATCGC 76059 || ||||| || ||||| Sbjct 799946 AACTTGGCCTCGATCGC 799930 >seq116 Length=1878684 Score = 129 bits (142), Expect = 7e-25 Identities = 275/408 (67%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || ||||||| | | || | ||| ||||| |||||||||| ||| | || || | Sbjct 51481 TCGACAAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCGGGGGTG 51422 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| | |||||| | || || ||||| || || ||||| || | Sbjct 51421 TCTTGCTGCAGCATCATCCACATACCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGC 51362 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | || ||||| | ||| | || | ||| | || | ||| Sbjct 51361 TTGGCCTCCATATTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 51302 Query 177739 CCATCAGTA-ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAA 177797 | || | | |||||| | ||||||||| | ||| || | ||| || ||||||||||| Sbjct 51301 GC-TCGGGAGATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAA 51243 Query 177798 GAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTG 177857 | ||| ||| ||| || ||||| || || || || ||||| || ||||||| |||| Sbjct 51242 CAAGATACCGTTGCACGCGTACATGCCGTACGACTCGCGGTAGTTCTTGACGATCCAGAA 51183 Query 177858 AGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTG 177917 ||| ||| |||| ||| || || || || ||||||||||| ||| ||| | ||| Sbjct 51182 GGCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTG 51123 Query 177918 TGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| || || ||| ||| ||||| ||||||||||| Sbjct 51122 AGGGGTCTCGACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTA 51075 >seq94 Length=1157722 Score = 109 bits (120), Expect = 7e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 419624 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 419565 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 419564 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 419505 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 419504 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGAGTCGTCTCGGACTGAGGGGTCTCG 419445 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 419444 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 419407 >seq136 Length=1817790 Score = 87.8 bits (96), Expect = 2e-12 Identities = 228/340 (67%), Gaps = 12/340 (4%) Strand=Plus/Minus Query 13561 CAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA--AAGTGTACTCTCATT 13618 |||| | || || |||||||| || |||||| | | | || ||||| || ||||| Sbjct 1192897 CAAGCTCGAAGATGCGAACAACGCTGGTACG--AGGAACGGGTCCAAGTGCACGCTCATC 1192840 Query 13619 GTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGT 13678 | || || || ||||| || || | ||||| || ||||||| ||||||| ||||| Sbjct 1192839 TTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCTGTCGTCGGTCGA 1192780 Query 13679 GATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTG 13738 || |||| ||||| ||||| | || || || | || || || || || ||| Sbjct 1192779 GACAACTATGGTGTCTTCCCTTTGCGAGGAAAGTTGCTCAACGTGCGTGAAGCGGCGG-- 1192722 Query 13739 GCACAGCTCACATCAAACCAG--GAG-TTCAA-CGATCTCAAGAAGATCCTTGGTCTTCA 13794 ||| ||| | | || | | ||| ||||| ||||| ||| ||||| | ||||| || Sbjct 1192721 GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATC--AAGCAGATCTTGGGTCTGCA 1192664 Query 13795 ACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGAC 13854 || || |||| ||| || || || || || || || ||||| ||| | Sbjct 1192663 GCAGGGCAAAGTTTACACCGACGTCGACTCGCTCCGTTACGGCAAGCTCATGATCATGGC 1192604 Query 13855 AGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894 ||| ||| | ||||| || |||||||||||||| ||| Sbjct 1192603 CGATCAAGATCACGATGGATCGCACATCAAGGGTCTGATC 1192564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568429232160