Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq63 136 4e-27 seq136 127 2e-24 seq86 120 3e-22 >seq63 Length=1462319 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| ||||| || || || || || || ||||| || || | | Sbjct 870176 GATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 870235 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || ||||| |||||||| ||||| || || || || | Sbjct 870236 GGACACGATTGACAACGTCAAGAC-CAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870294 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||| || ||||||||||| || || ||||| |||||| | | | | ||||| | Sbjct 870295 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870354 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| ||||| || |||||||||||||| | ||||| || Sbjct 870355 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGTCTCCGCGGTGG 870403 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || || ||||| || || | | Sbjct 870405 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870464 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||| |||||||| ||||| || || || || || Sbjct 870465 GACACGATTGACAACGTCAAGAC-CAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCA 870523 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 870524 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 870583 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || |||||||||||||| Sbjct 870584 CATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCG 870619 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| || || || || || || ||||| || || | | Sbjct 870633 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870692 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || ||| |||||||| ||||| || || || || || Sbjct 870693 GACACGATTGACAACGTCAAGACCAA-GATTCAAGACAAGGAAGGCATTCCCCCAGACCA 870751 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 870752 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 870811 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 870812 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 870847 >seq136 Length=1817790 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 239097 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 239038 Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || |||| || || || |||||||||||| ||||| || || || || || Sbjct 239037 ACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 238979 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | | ||||| ||| Sbjct 238978 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAAC 238919 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || ||||||||| | || |||| || || Sbjct 238918 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 238872 >seq86 Length=231977 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| |||||| | || || || || || || || || || ||||| || || | |||| Sbjct 67223 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 67164 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| || || || |||||||||||| ||||| || || || || || | Sbjct 67163 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 67105 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | | ||||| |||| Sbjct 67104 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAACA 67045 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| ||||| || |||||||| Sbjct 67044 TCCAAAAGGAGTCGACCCTCCACTTGGT 67017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896717075960