Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq46 201 2e-45 seq75 122 1e-21 seq136 116 6e-20 seq94 113 7e-19 seq63 86.0 1e-10 >seq46 Length=827519 Score = 201 bits (222), Expect = 2e-45 Identities = 200/259 (77%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||| |||||||| |||| ||| |||| ||||||||||| || | |||||| || Sbjct 800416 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 800475 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||| |||||||| | ||||| ||| | ||||| | ||||| | || ||| Sbjct 800476 TAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 800535 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||||||||||||||||||| | || ||||| ||||||||||| || Sbjct 800536 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 800595 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||| || ||||||| | ||| || |||||||| |||||| | | ||| ||| Sbjct 800596 ATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCG 800655 Query 2073781 GCATTGAAGAGCGTGGGCG 2073799 ||||||||||| || |||| Sbjct 800656 GCATTGAAGAGTGTCGGCG 800674 Score = 145 bits (160), Expect = 1e-28 Identities = 298/449 (66%), Gaps = 0/449 (0%) Strand=Plus/Plus Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623 |||| ||| ||| || || ||||||||||||||| | |||| | | ||||| |||||| Sbjct 799966 GGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTC 800025 Query 2071624 TGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCG 2071683 | ||||| | ||| ||||||| |||| |||||| |||| || || ||| Sbjct 800026 TTTTGGTTCGATTTTTTGTTCGCGGCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCG 800085 Query 2071684 ATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGG 2071743 | ||| || | || || |||||| || ||||||| | || || | |||||| Sbjct 800086 ACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGG 800145 Query 2071744 CCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGG 2071803 |||| | | |||| || | |||| | | ||||| ||| Sbjct 800146 CCCTCCTTTTCGTATTTTTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGG 800205 Query 2071804 CCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATA 2071863 ||||| || || | ||||| ||||| | ||| |||||| | | | | || || |||| Sbjct 800206 CCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATA 800265 Query 2071864 AACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCG 2071923 ||||| ||| |||| || | | |||||||| || || ||| ||||||||||| Sbjct 800266 AACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCA 800325 Query 2071924 TGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAG 2071983 |||||||| ||||| || | |||| || ||| |||||||| ||||| |||||| Sbjct 800326 TGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATC 800385 Query 2071984 GCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || ||||| || |||||| ||| || Sbjct 800386 GCGAAGGCTCCGGGACGCTTGTTGCCACC 800414 Score = 116 bits (128), Expect = 6e-20 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 |||||||||||||||| ||| || | |||| | || ||||||| ||||||||||| Sbjct 798805 TGGTCGACGGTAAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCCC 798864 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGA-TGGACTCGGCATTCGG 2069369 ||||| || || || ||| ||||| |||||||||||||| | | | | || || Sbjct 798865 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGTTGGG 798924 Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429 || || ||| || ||||||||| || |||||||| ||| | || ||||||| Sbjct 798925 CTCGACA-AGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCGCCTCGATCGGCCGA 798983 Query 2069430 CATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAGAT 2069488 || ||||| | | | ||| || | |||||| ||||||||| | | ||||||||||| Sbjct 798984 CAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 799042 Score = 89.7 bits (98), Expect = 8e-12 Identities = 140/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCT 2070109 ||| || |||||||| ||||| ||||| ||| |||||| ||||| ||| | Sbjct 799665 CGCGGCGTGGTAGATGGTCTCGAAGATT-TGCTTGTTGAGCTTGCGCGCCTCGGGCGAAT 799723 Query 2070110 CCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCAT 2070167 | |||||| ||| | | || ||||||||||| || || ||||| |||| ||| || Sbjct 799724 CGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGAT 799781 Query 2070168 CGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 || |||||||| | ||| |||| | | |||||| || || |||| ||| | |||||| Sbjct 799782 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTAACGTCGAT 799841 Query 2070228 CACGCGGTTGAGGTTG 2070243 | |||||| | |||| Sbjct 799842 GATGCGGTTCAAGTTG 799857 >seq75 Length=1932057 Score = 122 bits (134), Expect = 1e-21 Identities = 164/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544 ||||||| || || |||| ||||||| ||| || ||| || | | ||||| ||| || | Sbjct 284682 CCTTGGTGCCTTCCGAGATGGCGTGCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCG 284623 Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601 ||||||||||||||| | | |||||| ||| | |||| || ||| || | Sbjct 284622 AGGTCTGGATCTCGCGCGAGGAGATCGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGG 284566 Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661 |||||| | ||| || |||| ||||||||||| |||||||| | ||| ||||| Sbjct 284565 AAGCCTCGAGGGAGATACGCTCGAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCG 284506 Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| ||| ||||||||| || ||||| | ||| ||| Sbjct 284505 CCTTGTTCGAGATACCCGTGTCGGGGTGGACTTGCTTCAACACTTTG 284459 Score = 109 bits (120), Expect = 9e-18 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544 |||| || || || |||| ||||||| ||| ||| || ||| | | ||||| || || | Sbjct 602601 CCTTTGTGCCTTCCGAGATGGCGTGCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCG 602660 Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601 ||||||||||||||| | ||| || ||| | |||| || ||| || | Sbjct 602661 AGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGG 602717 Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661 || ||| | |||||| || | ||||||||||| |||||||| | |||| ||||| Sbjct 602718 ACGCTTCGAGGGTGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATCAGCATCG 602777 Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| || ||||||||| || ||||| | ||||||| Sbjct 602778 CCTTGTTCGAGATACCGGTGTCGGGGTGGACTTGCTTCAACACCTTG 602824 Score = 109 bits (120), Expect = 9e-18 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544 |||| || || || |||| ||||||| ||| ||| || ||| | | ||||| || || | Sbjct 1374530 CCTTTGTGCCTTCCGAGATGGCGTGCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCG 1374471 Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601 ||||||||||||||| | ||| || ||| | |||| || ||| || | Sbjct 1374470 AGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGG 1374414 Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661 || ||| | |||||| || | ||||||||||| |||||||| | |||| ||||| Sbjct 1374413 ACGCTTCGAGGGTGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATCAGCATCG 1374354 Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| || ||||||||| || ||||| | ||||||| Sbjct 1374353 CCTTGTTCGAGATACCGGTGTCGGGGTGGACTTGCTTCAACACCTTG 1374307 >seq136 Length=1817790 Score = 116 bits (128), Expect = 6e-20 Identities = 158/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 796140 AAAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199 ||| ||||| ||||||| | || ||||| || ||| | || |||| |||||| Sbjct 1454635 AAAGCACCTCGCCTCGGCGAACTGCACCTCGCTCGAGAACCTCTCGACCAGATTCTCATT 1454576 Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259 ||||| || || |||||||| |||||||| ||||| |||||||| || ||||| Sbjct 1454575 CACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCGATAAAGTAGCGTTCGTC 1454516 Query 796260 GTCGCTGAGCGAGAC---CCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316 || | ||||| | ||||| | |||| ||||||||||| ||| ||||||| Sbjct 1454515 GTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTCGATCTCTTCGGCGGA 1454456 Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||||||| || | ||| | ||||||||| |||| ||| Sbjct 1454455 CCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAATC 1454416 >seq94 Length=1157722 Score = 113 bits (124), Expect = 7e-19 Identities = 144/198 (73%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| | |||||||| ||| || || ||| |||||| ||||||||| Sbjct 235540 GCCTCGGCTGACTGGACCTCACCAGAGAATCGCTCGACCAAGTTCTCGTTGACGATGCCG 235481 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||||||||||||||||||| ||| |||| ||||||||| ||||| Sbjct 235480 TCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAGC 235421 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | | || | | ||| | ||| ||||||||||||||||| Sbjct 235420 TTGTTGTCCCAGTCGTGCATATCCTTGGACAAGTCCATCTCTTCGGCGGTCCAAAAGGAT 235361 Query 796327 GCCTCGGCCTTTTTGTAC 796344 |||||||| || |||||| Sbjct 235360 GCCTCGGCTTTCTTGTAC 235343 >seq63 Length=1462319 Score = 86.0 bits (94), Expect = 1e-10 Identities = 170/252 (67%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 2019147 GACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGC 2019206 |||||||| || | ||||||| | ||| ||||| || || || || ||| Sbjct 462938 GACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGGGC 462997 Query 2019207 CGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCC 2019266 ||||||||| | |||||||||| || ||||| | | || ||| |||||||| || Sbjct 462998 CGCCACAAGCTCGTCATCCTCGACGAAGCCGATTCGATGACCCCGGGAGCCCAGCAAGCG 463057 Query 2019267 CTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACG 2019326 ||||| ||| |||||| | | ||||||| || || || || | || |||||| | Sbjct 463058 CTCCGCAGGACGATGGAACTCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACCAG 463117 Query 2019327 TCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTC 2019386 | | ||||||| | | ||||| || |||||||||||| | | || | || Sbjct 463118 AGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCATCTTGAGGTACTCGAGGCTG 463177 Query 2019387 ACCGACGCCCAG 2019398 ||||| ||| || Sbjct 463178 ACCGATGCCGAG 463189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916229699193923