Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq136 123 2e-23 seq86 118 7e-22 seq63 113 3e-20 >seq136 Length=1817790 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| || || | || |||| |||| Sbjct 238887 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCC 238946 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 238947 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 239006 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 239007 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 239066 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || |||||||||||||| |||||||| |||| Sbjct 239067 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 239097 >seq86 Length=231977 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||| || ||||| || || | || |||| |||| Sbjct 67014 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCC 67073 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 67074 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 67133 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 67134 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 67193 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || ||||| || ||||| |||||||| ||| |||| Sbjct 67194 TTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 67228 >seq63 Length=1462319 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||||||||| ||||| ||||| | || |||| |||| Sbjct 626002 AGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCC 625943 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || |||||||||||||| |||||| | || | ||||||||||| Sbjct 625942 TCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 625883 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | || || ||| Sbjct 625882 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATCGTC 625823 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||| ||||| Sbjct 625822 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625791 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || || || Sbjct 870368 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 870309 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| || |||||| | || | || |||||||| || | | || || |||||| Sbjct 870308 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTGACGT 870250 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | ||| || ||||| ||||| || ||||| | Sbjct 870249 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAA 870190 Query 34965 CAAAGATCTGCAT 34977 | ||||||||||| Sbjct 870189 CGAAGATCTGCAT 870177 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || || || Sbjct 870596 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 870537 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| || |||||| | || | || |||||||| || | | || || |||||| Sbjct 870536 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTGACGT 870478 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | ||| || ||||| ||||| || ||||| | Sbjct 870477 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGA 870418 Query 34965 CAAAGATCTGCAT 34977 | ||||||||||| Sbjct 870417 CGAAGATCTGCAT 870405 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || || || || || || Sbjct 625526 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 625467 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||||||||| |||||| | || | |||||||| || | || || |||||| Sbjct 625466 GATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 625407 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 625406 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 625347 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 625346 GAAGATTTGCAT 625335 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || || || || || || Sbjct 625754 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 625695 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||||||||| |||||| | || | |||||||| || | || || |||||| Sbjct 625694 GATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 625635 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 625634 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 625575 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 625574 GAAGATTTGCAT 625563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692176807183