Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq46 89.7 7e-13 >seq46 Length=827519 Score = 89.7 bits (98), Expect = 7e-13 Identities = 344/535 (64%), Gaps = 4/535 (1%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || | |||||| |||||||||||||| || || | |||||||| | | | | Sbjct 800254 ACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACT 800313 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || ||| || || ||||| | | |||| |||||||| Sbjct 800314 TCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCATGGC 800373 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || ||||| | | |||| || || || || || || || || | ||| | || Sbjct 800374 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 800433 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 ||||| || ||||| | ||||| || | || || || || | || || || || | Sbjct 800434 GTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCCGCG 800493 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || || | ||||| || || || | ||| || || || || | || Sbjct 800494 ATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTG 800553 Query 69895 GAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 ||||| || || | |||| || | ||||| || || || || || |||||| |||| Sbjct 800554 GAGATGAGCGCGC-ACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCATCCTTCAT 800612 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 | | || ||||| || | || | || ||||| ||||| || | ||| || Sbjct 800613 CGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCATTGAAGAGTGTCGG 800672 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATG-TTTCAATAGCTGATTCTA 70072 || ||||| ||||| | ||||| | || ||||| | || ||| | | || | Sbjct 800673 CGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTACGATTGCAAGA-CGCGCTCGA 800731 Query 70073 TATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 | || ||| || || | ||||||||||| | ||| ||||| || ||||| Sbjct 800732 TGTCGTGACCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGCGGGCGTTC 800786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907451941480