Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq46 179 5e-40 >seq46 Length=827519 Score = 179 bits (198), Expect = 5e-40 Identities = 552/847 (65%), Gaps = 9/847 (1%) Strand=Plus/Plus Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 799930 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 799989 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||||| ||| || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 799990 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCG 800049 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || || ||||| |||||| | || | || || || |||| | ||||| || | | Sbjct 800050 GCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 800109 Query 118890 CAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 || | | || || | || ||||| || ||||| | ||||| ||| | | Sbjct 800110 CAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTTTCGAAC 800169 Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 119009 | ||| |||||||| || | | || ||| || || || | | | ||||||||| Sbjct 800170 AAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAG 800229 Query 119010 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069 || | ||| | || | |||| || |||| ||| || || || || ||||||||||| Sbjct 800230 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCA 800289 Query 119070 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129 |||||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 800290 AAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAAC 800349 Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 119186 || | || || |||||||| || || ||||| | ||||| | || ||| Sbjct 800350 TCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 800409 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| | |||| || || | ||| ||| ||| | ||||| ||||| || | ||| || Sbjct 800410 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCG 800469 Query 119247 TCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGT 119304 | || | ||| || || ||| ||| || ||| | | || | || | ||||||| Sbjct 800470 TTCGAGTAGCCGTTCGTGCCCGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATGC 800527 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 || ||| ||||| || || ||| ||||| |||||||| | |||| || |||||| Sbjct 800528 TCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGA 800587 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424 | || || ||||| ||| |||| | | || ||||| || ||| | || || | Sbjct 800588 TGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAG 800647 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484 | || || || |||||||| || || | |||||| |||| | | ||||| || Sbjct 800648 GCGTTCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGT 800707 Query 119485 CGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543 ||| | | ||||||| || | ||||| | || || || || | | ||| ||||| Sbjct 800708 TGTACGATTGCAAGACGCGCTCG-ATGTCGTGACCATGGATGCCAACGGCGACACGCATG 800766 Query 119544 AACATGT 119550 | ||||| Sbjct 800767 AGCATGT 800773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433986320920