Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12-
23] 157 sequences; 32,762,276 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq63 118 3e-21
seq136 104 7e-17
seq86 98.7 3e-15
>seq63
Length=1462319
Score = 118 bits (130), Expect = 3e-21
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | || || | || || || ||||| || || || || |
Sbjct 625569 TTTGCATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 625510
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| | | || || ||||| || || ||||| ||||||||||| || ||||| || |
Sbjct 625509 AATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGT 625450
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || |||||||| || || || || || || || |||| || || |
Sbjct 625449 CTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGG 625390
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | ||||| ||||| || || || || || || |||||
Sbjct 625389 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625335
Score = 118 bits (130), Expect = 3e-21
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | || || | || || || ||||| || || || || |
Sbjct 625797 TTTGCATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 625738
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| | | || || ||||| || || ||||| ||||||||||| || ||||| || |
Sbjct 625737 AATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGT 625678
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || |||||||| || || || || || || || |||| || || |
Sbjct 625677 CTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGG 625618
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | ||||| ||||| || || || || || || |||||
Sbjct 625617 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625563
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| ||||| || ||||| || || || || || || | | || || ||||| || |
Sbjct 625997 CAAG-TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGA 625939
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || ||||||||||| || ||||| || || || ||||| || || || ||||| |
Sbjct 625938 GCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGA 625879
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || || || || || || |||| || || | || || || || || | ||||| |
Sbjct 625878 TCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATCGTCTTGC 625819
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| || || || || || || |||||
Sbjct 625818 CGGTCAGGGTCTTGACGAAGATTTGCAT 625791
Score = 100 bits (110), Expect = 9e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| ||||| | | | || | || || || ||||| || || || || |
Sbjct 870639 TTTGCATACCCCCACGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGT 870580
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| | | || || ||||| || || || || ||||||||||| | || || || |
Sbjct 870579 AATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGT 870520
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| ||||| || || ||||| || | || || || ||||||| || || |
Sbjct 870519 CTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACG 870460
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | ||||| || || || || || || || ||||||||
Sbjct 870459 ACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870405
Score = 96.9 bits (106), Expect = 1e-14
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || || || ||||| || || || || ||||| | | || || ||||| || |
Sbjct 870383 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 870325
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || ||||||||||| | || || || || || ||||| ||||| || || ||||
Sbjct 870324 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 870265
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || | || || || ||||||| || || | || || || || || | ||||| |
Sbjct 870264 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGC 870205
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || || || ||||||||
Sbjct 870204 CCGTAAGCGTCTTAACGAAGATCTGCAT 870177
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || || || ||||| || || || || ||||| | | || || ||||| || |
Sbjct 870839 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 870781
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || ||||||||||| | || || || || || ||||| ||||| || || ||||
Sbjct 870780 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 870721
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || | || || || ||||||| || || | || || || || || | ||||| |
Sbjct 870720 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGC 870661
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || || || || |||||
Sbjct 870660 CCGTAAGCGTCTTGACGAAGATTTGCAT 870633
>seq136
Length=1817790
Score = 104 bits (114), Expect = 7e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | || || || ||||| ||||| || || ||||| |
Sbjct 238871 ACCACCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGC 238930
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| || || || || || |||||||| ||||||||||| || || ||
Sbjct 238931 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGG 238990
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| ||||| || || || || || | || || || || |||| || || | || ||
Sbjct 238991 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 239050
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736
|| || || | ||||| || || || || || ||||| || ||||
Sbjct 239051 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 239097
>seq86
Length=231977
Score = 98.7 bits (108), Expect = 3e-15
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586
|| |||| || || || ||||| ||||| || || ||||| | | || || ||||| |
Sbjct 67016 GACCAAG-TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCT 67074
Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646
| || || || || |||||||| ||||||||||| || || || || ||||| || || |
Sbjct 67075 CGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTT 67134
Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706
| || || | || || || || |||| || || | || || || || || | ||||
Sbjct 67135 GGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCT 67194
Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGC 140735
| || || || || || ||||| || |||
Sbjct 67195 TGCCCGTAAGAGTCTTGACAAAGATTTGC 67223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251351971071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |