Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq46 455 4e-123 seq136 91.5 2e-13 seq94 91.5 2e-13 >seq46 Length=827519 Score = 455 bits (504), Expect = 4e-123 Identities = 791/1139 (69%), Gaps = 12/1139 (1%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| || ||||||||||| ||||| || ||| ||| Sbjct 800780 CCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAGCGCGTC 800721 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 | | ||| |||| ||| || | |||||| ||||| ||||||| || ||| Sbjct 800720 TTGCAATCGTACAACCTCATGTCTGAGCGCTACTTCACCCACGCCTCGCCGACACTCTTC 800661 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || ||||| ||| |||||||| | ||| |||||||| || | ||||||||||| Sbjct 800660 AATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACGATGAAGGATGAT 800601 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| ||||||||||| ||||||||| |||||||| |||||||||| |||| Sbjct 800600 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 800541 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | | | || ||||| ||| || | ||| || |||||| Sbjct 800540 GGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTACATCGCGGGCACGAAC 800481 Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||| ||| |||||||| |||||||| |||| ||||||||| || | ||||| Sbjct 800480 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 800422 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | |||| || ||| ||| || || | ||||| ||||||||||||||||||||||| Sbjct 800421 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGC 800362 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||||| || || ||| |||||| || | ||||| | ||| ||| Sbjct 800361 TGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGGAAGTCCGCGCTCG 800302 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || |||||| || | |||||||| || || || |||||| || ||| | || Sbjct 800301 TGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGCCGG 800242 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || |||| ||| | ||||| ||| ||| ||||| | ||| ||||| ||||| | Sbjct 800241 CGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGA 800182 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 |||| | |||| | | |||| | ||||||| ||||||| | ||| || Sbjct 800181 GTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC 800122 Query 19762 CCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGT 19820 | | | ||| | |||| | || || ||||||||| || |||| || | |||| Sbjct 800121 GCAAAAACTTTGGTA-CGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCCTTCATGC 800063 Query 19821 GCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGT 19880 |||||| |||||||||||| || || || || |||||| | ||| |||||||||||| Sbjct 800062 TCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGT 800003 Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940 | |||||||| || || ||||| ||| || |||||||||| ||||| || || Sbjct 800002 CGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGCAACT 799943 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGT 20000 |||| || | |||||| ||| ||||| | | | | ||||||| || ||| Sbjct 799942 TGGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGCTTACGACTTTAAGAAGTTGC 799883 Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-C 20059 ||||||| | ||||||| | || |||| ||| ||||||| |||| || | Sbjct 799882 ACGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTTAACTACTATC 799823 Query 20060 CCG--ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCC 20117 ||| | ||| ||||| || || || | |||||||| || |||| ||||| || | Sbjct 799822 CCGTCATCGA---GGCGCAGAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGC 799766 Query 20118 AGGGCCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGC 20176 | || || ||||||| |||||| || ||| | | ||||| ||| |||||||| Sbjct 799765 AAGGTCTCGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGC 799707 Query 20177 GAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||||| ||||||||| || | |||||||| || || | |||||||| Sbjct 799706 AAGCTCAACAAGCAAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 799648 Score = 398 bits (440), Expect = 8e-106 Identities = 776/1136 (68%), Gaps = 14/1136 (1%) Strand=Plus/Plus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 799657 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCC 799713 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 799714 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 799772 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAA 78950 ||| |||| || |||||||| | |||| || | ||||||| | |||| || | Sbjct 799773 GATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTG---CGCCTCGATGACGGGATAGTA 799829 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 799830 GTTAACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 799889 Query 79011 GGCGAAATCAAAAT-GATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || || | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 799890 CTTAAAGTCGTAAGCGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 799948 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || ||||||| || ||||||| Sbjct 799949 AGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACT 800008 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | |||||| ||||| || | ||| |||||| |||||| |||| Sbjct 800009 TGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCGGCGTCTTTGTAGAGCATGA 800068 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| | |||| ||| ||| | | | || ||| Sbjct 800069 AGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTTGCGCGGGGA 800128 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||||||| || |||| |||| | | |||| || ||| | || | Sbjct 800129 TCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTTTCGAACAAGGCGCGGAACTCTTCGC 800188 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | ||||| ||| || ||||| | ||| |||| || || | Sbjct 800189 CATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCCGGCGG 800248 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||| || || || || ||||| || || |||||| || || | Sbjct 800249 CCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 800308 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||| ||||||| Sbjct 800309 GGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCC 800368 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 | ||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 800369 ATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 800428 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||||||| | || ||||||||||| |||||||||| | | ||||||||| | Sbjct 800429 GCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 800488 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 | ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 800489 CCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 800548 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||||||||| ||||||||||| || ||||| || |||| Sbjct 800549 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCATCCT 800608 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||||||| || ||| | ||| |||| ||| ||||| |||||||| | Sbjct 800609 TCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCATTGAAGAGTG 800668 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| |||||| | | ||| || | ||||| | | ||||||| Sbjct 800669 TCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTACGATTGCAAGACGCGCT 800728 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGT 79904 || ||||| || |||||||| || ||||| ||||||| | || ||| |||||| Sbjct 800729 CGATGTCGTGACCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGCGGGCGT 800784 Score = 140 bits (154), Expect = 4e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| ||||||||||||||||| || || |||||| ||||| | ||| Sbjct 798837 GGCGCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 798896 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || || | |||| | ||| || || | |||||||||||| || ||||| Sbjct 798897 CATCGACGTGAGTTGCGCCATCGTTGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 798956 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | || || || ||||||| || ||||| | | |||||||| | |||||| Sbjct 798957 GTCGATGAAGGCGCCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 799016 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 799017 GACGGTCTTGTAGATGGCCTTGAGATC 799043 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || ||||| || || Sbjct 799040 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCG 798981 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 |||||||| ||||||| |||||||||||| || |||||||| || | || || || Sbjct 798980 GCCGATCGAGGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCA 798921 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| | || | || ||||| | ||||||||| | || || ||||||||| Sbjct 798920 ACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGC 798861 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 798860 ATGTACTACTTGCGCACGCGCGCC 798837 >seq136 Length=1817790 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| ||||| ||| | || || ||||||||||| || ||||||||||| |||||| Sbjct 1455099 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTGTC 1455158 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||||||||||| || ||||| ||||| || || ||| Sbjct 1455159 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 1455198 >seq94 Length=1157722 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| || Sbjct 236049 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTT 236108 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 236109 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 236143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523723520080