Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq86 122 2e-22 seq136 118 2e-21 seq63 102 2e-16 >seq86 Length=231977 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| |||||||||||||||||||| | ||| | Sbjct 67007 GAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCG 67066 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||| ||||| || | |||||||| | || ||| ||||| Sbjct 67067 GCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTC 67126 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || ||| || || || || Sbjct 67127 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 67186 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || || |||||||| |||||||| || |||| Sbjct 67187 GATCGTCTTGCCCGTAAGAGTCTTGACAAAGA 67218 >seq136 Length=1817790 Score = 118 bits (130), Expect = 2e-21 Identities = 151/207 (73%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| |||||||||||||||||||| | ||| | ||||| || | Sbjct 238892 CAAG-TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGA 238950 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| || | |||||||| | || ||| |||||||| ||||| | Sbjct 238951 GCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGA 239010 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 239011 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 239070 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||||| ||||| || |||| |||| Sbjct 239071 CCGTGAGGGTCTTGACAAAGATTTGCA 239097 >seq63 Length=1462319 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||||||||| | || | ||||| || | Sbjct 870383 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 870325 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | | ||| ||||| | | || |||||||| ||||||| Sbjct 870324 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 870265 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 870264 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGC 870205 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||||| |||||| Sbjct 870204 CCGTAAGCGTCTTAACGAAGATCTGCAT 870177 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||||||||| | || | ||||| || | Sbjct 870611 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 870553 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | | ||| ||||| | | || |||||||| ||||||| Sbjct 870552 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 870493 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 870492 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGC 870433 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||||| |||||| Sbjct 870432 CCGTAAGCGTCTTGACGAAGATCTGCAT 870405 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||||||||| | || | ||||| || | Sbjct 870839 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 870781 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | | ||| ||||| | | || |||||||| ||||||| Sbjct 870780 GCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 870721 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 870720 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGC 870661 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||||| ||||| Sbjct 870660 CCGTAAGCGTCTTGACGAAGATTTGCAT 870633 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || ||||||||||||||||| | || | Sbjct 625553 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCG 625494 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||| || || ||||| || | || ||||| | | || || || Sbjct 625493 GCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTC 625434 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | |||| || ||| || || || || Sbjct 625433 CTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 625374 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 625373 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625335 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || ||||||||||||||||| | || | Sbjct 625781 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCG 625722 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||| || || ||||| || | || ||||| | | || || || Sbjct 625721 GCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTC 625662 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | |||| || ||| || || || || Sbjct 625661 CTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 625602 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 625601 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625563 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || ||||| || ||||||||||| ||||| | || | Sbjct 626009 GAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCG 625950 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | || ||||| | | || || || Sbjct 625949 GCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTC 625890 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | |||| ||| ||| || || || || Sbjct 625889 CTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGT 625830 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 625829 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818479017347