Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq15 86.0 1e-11 seq10 86.0 1e-11 >seq15 Length=534025 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 319012 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 319071 |||||||||||||| ||||| | | ||| | || || || ||||||||||||||||| Sbjct 222334 TAACGCCATTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAAC 222275 Query 319072 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 319113 || || || |||||||| || | ||||| || || |||||| Sbjct 222274 GCGTGTTGGGCCACGTACGCTACACGCAAGTTGGGGTGCTTC 222233 >seq10 Length=1588530 Score = 86.0 bits (94), Expect = 1e-11 Identities = 177/260 (68%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 281768 GTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGG--CAACAACCAGTTAATG 281825 |||||||||||| |||| | || ||||| ||||| | ||| | | || ||| | | Sbjct 565436 GTCTTTACCACCTTGCAAACGCGTACCAAATTGACCGTTCGGGTCGAGAA--TGTTGAGG 565379 Query 281826 TTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCA 281885 || ||| ||| || | | || ||||| || ||| || || || | | ||| Sbjct 565378 TTGTTGGACCCTACAAACTGTTGCGCCAGACCGATGATGGTGCCTTGCAAACTCATTTCA 565319 Query 281886 CCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTCT 281945 ||||| || || || ||| ||||| || ||||| | || ||| | ||||| | ||| Sbjct 565318 CCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCT 565259 Query 281946 GATGTCAAGTTGCGTTTGAAAGCGCAA---TATAATACTTTTCGTTGAGAAGGCTTGAAA 282002 ||||| ||||| ||||| |||| | || || || |||||| |||||||| Sbjct 565258 TGCGTCAATTTGCGCTTGAA---GCAACCGAACAAGACCTTGCGTTGACCCGGCTTGAAC 565202 Query 282003 CCATCAACGACAGACGGAAT 282022 ||||||| |||||| ||||| Sbjct 565201 CCATCAATGACAGAGGGAAT 565182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823498525310