Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq26 100 2e-16 >seq26 Length=1828681 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1303354 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303295 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1303294 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303235 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1303234 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303175 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1303174 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1303140 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1303582 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303523 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1303522 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303463 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1303462 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303403 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1303402 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1303368 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1304038 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303979 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1303978 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303919 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1303918 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303859 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1303858 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1303824 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || || || ||| || || | Sbjct 1305406 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1305347 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || || || || || || | ||| ||| ||| Sbjct 1305346 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1305287 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1305286 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1305227 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1305226 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1305192 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || |||| ||||| || || || ||| || || | Sbjct 1305634 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1305575 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| ||||| || || || || | ||| ||| ||| Sbjct 1305574 GACACGATTGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1305515 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||||||||| ||| | || ||| | || | || |||||||| Sbjct 1305514 CAACGTCTTATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACGCTCGCGGATTACAAC 1305455 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||||||||| || || || ||| ||||| Sbjct 1305454 ATTCAAAAGGAGTCGACCCTCCACTTGGTG 1305425 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| ||||| || ||| || | || Sbjct 1063356 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCA 1063297 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || ||| || || || || | ||| ||| ||| Sbjct 1063296 GACACGATTGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 1063237 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | || |||||||| Sbjct 1063236 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACGCTCGCAGATTACAAC 1063177 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || || ||||| || || || ||| ||||| Sbjct 1063176 ATCCAGAAGGAGTCGACCCTCCACTTGGTG 1063147 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1303126 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303067 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1303066 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303007 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1303006 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1302947 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1302946 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1302912 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1303810 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303751 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1303750 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303691 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1303690 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303631 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1303630 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1303596 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1304266 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1304207 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1304206 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1304147 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1304146 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1304087 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1304086 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1304052 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1304494 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1304435 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1304434 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1304375 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1304374 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1304315 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1304314 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1304280 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1304722 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1304663 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1304662 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1304603 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1304602 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1304543 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1304542 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1304508 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1304950 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1304891 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1304890 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1304831 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1304830 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1304771 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1304770 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1304736 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1305178 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1305119 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1305118 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1305059 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1305058 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1304999 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1304998 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1304964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796614756318