Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq26 98.7 8e-16 >seq26 Length=1828681 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || || |||||||||||||||||||| | || | ||| || Sbjct 1303146 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1303205 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || | Sbjct 1303206 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1303265 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| || |||| || | ||||| | ||| Sbjct 1303266 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1303325 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| || || || || |||||||| Sbjct 1303326 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1303354 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || || |||||||||||||||||||| | || | ||| || Sbjct 1303374 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1303433 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || | Sbjct 1303434 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1303493 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| || |||| || | ||||| | ||| Sbjct 1303494 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1303553 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| || || || || |||||||| Sbjct 1303554 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1303582 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || || |||||||||||||||||||| | || | ||| || Sbjct 1303830 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1303889 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || | Sbjct 1303890 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1303949 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| || |||| || | ||||| | ||| Sbjct 1303950 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1304009 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| || || || || |||||||| Sbjct 1304010 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1304038 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || || |||||||||||||||||||| | || | ||| || Sbjct 1305198 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1305257 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || Sbjct 1305258 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 1305317 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| || |||| || | ||||| | ||| Sbjct 1305318 ATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1305377 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| || || ||||| |||||||| Sbjct 1305378 CCGGTCAAGGTCTTGACAAAGATTTGCAT 1305406 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || |||||||||||||| || || | || | ||| Sbjct 1305423 AGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCCGCGAGCGTACGGCCATCC 1305482 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | ||| ||||||||| ||||||| | |||||| || ||| | ||| ||||| || Sbjct 1305483 TCGAGTTGCTTGCCCGCAAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 1305542 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| |||||| | ||| ||||| || |||| || | ||||| | Sbjct 1305543 TGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 1305602 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||||| || || ||||| |||||||| Sbjct 1305603 TTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 1305634 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || || || |||||||| || || | || | ||| Sbjct 1063145 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCC 1063204 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || Sbjct 1063205 TCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 1063264 Query 18234 GCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||| ||| | |||||| | ||| ||||| | |||| || | |||||| | Sbjct 1063265 TGAATCTTGGT-CTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGTGATGGT 1063323 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || ||||| |||||||| Sbjct 1063324 CTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1063356 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | || |||| ||| || || || || || || |||||||||||||| Sbjct 1302671 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1302730 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | ||| || | || || |||||| |||| || | |||||| || ||| Sbjct 1302731 GAGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGG 1302790 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || ||| | |||||| | ||| ||||| || |||| Sbjct 1302791 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGAC 1302850 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||| | ||||||||||| || || || || |||||||| Sbjct 1302851 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1302898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343828939565