Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq26 98.7 8e-16
>seq26
Length=1828681
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || || || |||||||||||||||||||| | || | ||| ||
Sbjct 1303146 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1303205
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || |
Sbjct 1303206 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1303265
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| || |||| || | ||||| | |||
Sbjct 1303266 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1303325
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || || || ||||||||
Sbjct 1303326 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1303354
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || || || |||||||||||||||||||| | || | ||| ||
Sbjct 1303374 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1303433
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || |
Sbjct 1303434 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1303493
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| || |||| || | ||||| | |||
Sbjct 1303494 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1303553
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || || || ||||||||
Sbjct 1303554 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1303582
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || || || |||||||||||||||||||| | || | ||| ||
Sbjct 1303830 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1303889
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| || |
Sbjct 1303890 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1303949
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| || |||| || | ||||| | |||
Sbjct 1303950 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1304009
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || || || ||||||||
Sbjct 1304010 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1304038
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || || || |||||||||||||||||||| | || | ||| ||
Sbjct 1305198 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1305257
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| ||
Sbjct 1305258 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 1305317
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| || |||| || | ||||| | |||
Sbjct 1305318 ATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1305377
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || ||||| ||||||||
Sbjct 1305378 CCGGTCAAGGTCTTGACAAAGATTTGCAT 1305406
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || || |||||||||||||| || || | || | |||
Sbjct 1305423 AGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCCGCGAGCGTACGGCCATCC 1305482
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | ||| ||||||||| ||||||| | |||||| || ||| | ||| ||||| ||
Sbjct 1305483 TCGAGTTGCTTGCCCGCAAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 1305542
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|||| |||||| | ||| ||||| || |||| || | ||||| |
Sbjct 1305543 TGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 1305602
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||||| || || ||||| ||||||||
Sbjct 1305603 TTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 1305634
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || || || || |||||||| || || | || | |||
Sbjct 1063145 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCC 1063204
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | ||| ||||||||| |||| || | |||||| || ||| | ||| ||||| ||
Sbjct 1063205 TCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 1063264
Query 18234 GCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||| ||| | |||||| | ||| ||||| | |||| || | |||||| |
Sbjct 1063265 TGAATCTTGGT-CTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGTGATGGT 1063323
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||||| || || ||||| ||||||||
Sbjct 1063324 CTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1063356
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || || | || |||| ||| || || || || || || ||||||||||||||
Sbjct 1302671 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1302730
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | ||| || | || || |||||| |||| || | |||||| || |||
Sbjct 1302731 GAGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGG 1302790
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| ||| ||||| || ||| | |||||| | ||| ||||| || ||||
Sbjct 1302791 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGAC 1302850
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||||| | ||||||||||| || || || || ||||||||
Sbjct 1302851 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1302898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343828939565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |