Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq26 275 6e-69
seq27 114 1e-20
seq10 107 2e-18
>seq26
Length=1828681
Score = 275 bits (304), Expect = 6e-69
Identities = 963/1493 (65%), Gaps = 50/1493 (3%)
Strand=Plus/Minus
Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561
|| ||| |||| ||||| | || ||| || || |||||| ||||| |||||||||
Sbjct 22343 GAAGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGACGCGGTCGGC 22284
Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621
|| || || | | |||||||| | | |||||||||| ||| || |||||||
Sbjct 22283 ATGGGAGCGCAGACGAGCGAGTTGCGGAGACCGTGCTTTGCAATCTTCTCCTTGAGCTCG 22224
Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681
||||||||||||| |||| ||| |||||| |||||| |||||| |||||| ||||
Sbjct 22223 GACCAGTCCCACAAATCGCTCGGGGTCACA---CCCCACAAATCGTACTGCAACTCGCCC 22167
Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTA-----CGG----ACCA------------ 22720
|| ||||| || ||| || ||| ||| || |
Sbjct 22166 TGAGAAGCCGGAGATCCGGGGTAAGTCGAGTAGTAGCCGGGGTCACTAGGGTTAGCGATG 22107
Query 22721 --TATATCGCG-GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAG 22777
| ||||| || | ||||| || ||| | |||| ||| || || |||||||||
Sbjct 22106 GCAAAGTCGCGCGCCATATCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAG 22047
Query 22778 ATTTTCTTGTTCA-ATTCGGCGGC---GGCGACGCTTTCGTACGGCATACGCATCATCAC 22833
|| | |||||| | || ||| | || || ||| ||||||| || ||
Sbjct 22046 ATCTGCTTGTTGAGCTTGCGCGCCTCGGGTGA----ATCGAACGGCATCGCCAAGGCCAT 21991
Query 22834 GAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACAC 22893
||| ||||| || | ||| || || || || ||||| || |||| | || ||
Sbjct 21990 GAATGCGTCGGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTT 21931
Query 22894 TTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCAC 22953
|| |||||| | || || | || || || | | ||||||||| | ||
Sbjct 21930 TTGCGCCTCGATGACGGGGTAGTAGTTAACGTCAATGATGCGGTTCAAGTTGAAAGCGAC 21871
Query 22954 AATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAACTT 23013
| || | | |||||||| ||||| || | | || ||
Sbjct 21870 GACCTTGACGACCTCGTGCAGCTTCTTGAAGTCGTACACGCC--GTTCTTGATGAAGCTC 21813
Query 23014 GTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTAC 23073
| ||| |||||||||| | ||||| ||||| |||||| | | |||||| |
Sbjct 21812 GGCAACG-CGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGAT 21754
Query 23074 AATTTCGGTACATAGATTGCTAC-ACTTTATCGTGCCCAAATTGCTCTGGTT-GCTTTTT 23131
|||||||| || || || | || |||| |||||||| | || | ||||| | ||| |
Sbjct 21753 GATTTCGGTGCACAGGTT-CGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCT 21695
Query 23132 CGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATG 23191
| |||| | ||||||||||||||| |||| |||| || |||||||| | |||||
Sbjct 21694 TGTTTGC-GGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGA 21636
Query 23192 ATCGCTCGCCACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTA 23250
||||| ||| | | || ||| | | |||| | | | ||| || | |||||
Sbjct 21635 ATCGCGTACCAAAGCTTTTGCGCGGGGA-TCGTCTTCTTGGCGCGGCCCTCCTTTTCGTA 21577
Query 23251 CTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCAT 23310
|| | | ||| ||| || || | || ||| ||| |||||||| | ||
Sbjct 21576 TTTCTCGAACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGC 21517
Query 23311 CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTAT 23370
|| || | || ||| | | || || || ||| || ||||| || ||
Sbjct 21516 GGGGCAGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGAT 21457
Query 23371 CCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAA 23430
||| || || |||| || || || ||||| || ||||| |||||| |||||| |
Sbjct 21456 CCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAG 21397
Query 23431 ATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGG 23490
|||| || || || ||||| || ||||| ||||||||||| | || || || || ||
Sbjct 21396 GTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGG 21337
Query 23491 TCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGG 23550
| ||| ||||| || || |||||||| || || || |||||||| || | ||||| ||
Sbjct 21336 ACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGG 21277
Query 23551 CACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTT 23610
|||| ||||| || |||| ||| || | || || | || || | |||
Sbjct 21276 GACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT 21217
Query 23611 GTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGT 23670
||| | | ||||| || || ||| | | || || || | |||||| || || ||
Sbjct 21216 GTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGT 21157
Query 23671 GTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTG 23730
|||||||||||| ||||| || || || ||| ||||| ||| ||||| || | ||
Sbjct 21156 GTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTG 21097
Query 23731 CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGA 23790
|| | ||||| |||| ||| |||||||| |||||| |||||||| | | |||
Sbjct 21096 CGGGTGAGGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGA 21037
Query 23791 CATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGAC 23850
||| || ||||||| | | | || || ||||| | ||||| || |||| ||||||
Sbjct 21036 CATGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGAC 20977
Query 23851 GCGCATCATCATGTATTGAGGTC--TC-TCGACCGTGACGCCGTTAATTTTGAACAGATA 23907
|||||| | ||||| ||| |||| || ||||| | ||||| || | || |||
Sbjct 20976 GCGCATGAGCATGTGTTGCGGTCGTTCGGCGACCTT---GCCGTCGATGCGAAGCAAATA 20920
Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960
|| || | | ||| || || ||||| |||| ||| || || |||||||
Sbjct 20919 CGAGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGATCGT 20867
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| ||||| ||||| || |||||| |||| || || | ||
Sbjct 1063128 ATGCAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCG 1063069
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || ||| | |||||||| || | || || |||||
Sbjct 1063068 GACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAGGGTATTCCCCCAGACCA 1063010
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| | || ||||||||||| ||| | || || || | ||| || ||
Sbjct 1063009 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 1062950
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || ||||| ||||| ||||| |||| ||
Sbjct 1062949 CATCCAGAAAGAGTCGACCCTTCACTTGGTGCT 1062917
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| ||||| ||||| |||||||| |||| || || | ||
Sbjct 1305634 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1305575
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | ||| ||||||||| ||| | || || |||||
Sbjct 1305574 GACACGATTGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1305515
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTAT 31369
|| ||||| || || || ||||| || | || || | || | || | | |||||
Sbjct 1305514 CAACGTCTTATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACG-CTC-GCG-GATTAC 1305458
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||||||||| || ||||| || || |||| ||
Sbjct 1305457 AACATTCAAAAGGAGTCGACCCTCCACTTGGTGCT 1305423
>seq27
Length=880931
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| || |||||| ||||| |||||||| || ||||| ||||||||| |||| || || |
Sbjct 149958 AATCAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTC 150017
Query 31249 GTCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
|||||||| |||| | ||||| || ||| | |||||||||||| | || || |
Sbjct 150018 GTCCGACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAAGGCATCCCCCCAG 150076
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
||||||| ||||| || || || ||||| ||| | || || || | |||||
Sbjct 150077 ACCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATT 150136
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| ||||| ||||| || ||||| || || |||| ||
Sbjct 150137 ACAACATCCAAAAGGAGTCGACCCTCCACTTGGTCCT 150173
>seq10
Length=1588530
Score = 107 bits (118), Expect = 2e-18
Identities = 169/239 (71%), Gaps = 6/239 (3%)
Strand=Plus/Minus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
||||||| ||||| ||||| || || ||||| || |||||| |||| || || ||||||
Sbjct 1351188 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1351129
Query 31254 ACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
||| |||| | ||||| || ||| | |||||||||||| | || || ||||||
Sbjct 1351128 ACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAAGGCATCCCCCCAGACCAG 1351070
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || ||||| ||| | || || || | |||||| |||
Sbjct 1351069 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 1351010
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427
|| ||||| || ||||| || || |||| || | ||| | || ||| |||||||
Sbjct 1351009 ATCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAGAAGCG 1350951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766193833040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |