Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq26 275 6e-69 seq27 114 1e-20 seq10 107 2e-18 >seq26 Length=1828681 Score = 275 bits (304), Expect = 6e-69 Identities = 963/1493 (65%), Gaps = 50/1493 (3%) Strand=Plus/Minus Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| |||| ||||| | || ||| || || |||||| ||||| ||||||||| Sbjct 22343 GAAGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGACGCGGTCGGC 22284 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621 || || || | | |||||||| | | |||||||||| ||| || ||||||| Sbjct 22283 ATGGGAGCGCAGACGAGCGAGTTGCGGAGACCGTGCTTTGCAATCTTCTCCTTGAGCTCG 22224 Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681 ||||||||||||| |||| ||| |||||| |||||| |||||| |||||| |||| Sbjct 22223 GACCAGTCCCACAAATCGCTCGGGGTCACA---CCCCACAAATCGTACTGCAACTCGCCC 22167 Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTA-----CGG----ACCA------------ 22720 || ||||| || ||| || ||| ||| || | Sbjct 22166 TGAGAAGCCGGAGATCCGGGGTAAGTCGAGTAGTAGCCGGGGTCACTAGGGTTAGCGATG 22107 Query 22721 --TATATCGCG-GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAG 22777 | ||||| || | ||||| || ||| | |||| ||| || || ||||||||| Sbjct 22106 GCAAAGTCGCGCGCCATATCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAG 22047 Query 22778 ATTTTCTTGTTCA-ATTCGGCGGC---GGCGACGCTTTCGTACGGCATACGCATCATCAC 22833 || | |||||| | || ||| | || || ||| ||||||| || || Sbjct 22046 ATCTGCTTGTTGAGCTTGCGCGCCTCGGGTGA----ATCGAACGGCATCGCCAAGGCCAT 21991 Query 22834 GAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACAC 22893 ||| ||||| || | ||| || || || || ||||| || |||| | || || Sbjct 21990 GAATGCGTCGGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTT 21931 Query 22894 TTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCAC 22953 || |||||| | || || | || || || | | ||||||||| | || Sbjct 21930 TTGCGCCTCGATGACGGGGTAGTAGTTAACGTCAATGATGCGGTTCAAGTTGAAAGCGAC 21871 Query 22954 AATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAACTT 23013 | || | | |||||||| ||||| || | | || || Sbjct 21870 GACCTTGACGACCTCGTGCAGCTTCTTGAAGTCGTACACGCC--GTTCTTGATGAAGCTC 21813 Query 23014 GTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTAC 23073 | ||| |||||||||| | ||||| ||||| |||||| | | |||||| | Sbjct 21812 GGCAACG-CGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGAT 21754 Query 23074 AATTTCGGTACATAGATTGCTAC-ACTTTATCGTGCCCAAATTGCTCTGGTT-GCTTTTT 23131 |||||||| || || || | || |||| |||||||| | || | ||||| | ||| | Sbjct 21753 GATTTCGGTGCACAGGTT-CGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCT 21695 Query 23132 CGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATG 23191 | |||| | ||||||||||||||| |||| |||| || |||||||| | ||||| Sbjct 21694 TGTTTGC-GGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGA 21636 Query 23192 ATCGCTCGCCACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTA 23250 ||||| ||| | | || ||| | | |||| | | | ||| || | ||||| Sbjct 21635 ATCGCGTACCAAAGCTTTTGCGCGGGGA-TCGTCTTCTTGGCGCGGCCCTCCTTTTCGTA 21577 Query 23251 CTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCAT 23310 || | | ||| ||| || || | || ||| ||| |||||||| | || Sbjct 21576 TTTCTCGAACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGC 21517 Query 23311 CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTAT 23370 || || | || ||| | | || || || ||| || ||||| || || Sbjct 21516 GGGGCAGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGAT 21457 Query 23371 CCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAA 23430 ||| || || |||| || || || ||||| || ||||| |||||| |||||| | Sbjct 21456 CCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAG 21397 Query 23431 ATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGG 23490 |||| || || || ||||| || ||||| ||||||||||| | || || || || || Sbjct 21396 GTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGG 21337 Query 23491 TCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGG 23550 | ||| ||||| || || |||||||| || || || |||||||| || | ||||| || Sbjct 21336 ACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGG 21277 Query 23551 CACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTT 23610 |||| ||||| || |||| ||| || | || || | || || | ||| Sbjct 21276 GACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT 21217 Query 23611 GTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGT 23670 ||| | | ||||| || || ||| | | || || || | |||||| || || || Sbjct 21216 GTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGT 21157 Query 23671 GTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTG 23730 |||||||||||| ||||| || || || ||| ||||| ||| ||||| || | || Sbjct 21156 GTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTG 21097 Query 23731 CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGA 23790 || | ||||| |||| ||| |||||||| |||||| |||||||| | | ||| Sbjct 21096 CGGGTGAGGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGA 21037 Query 23791 CATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGAC 23850 ||| || ||||||| | | | || || ||||| | ||||| || |||| |||||| Sbjct 21036 CATGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGAC 20977 Query 23851 GCGCATCATCATGTATTGAGGTC--TC-TCGACCGTGACGCCGTTAATTTTGAACAGATA 23907 |||||| | ||||| ||| |||| || ||||| | ||||| || | || ||| Sbjct 20976 GCGCATGAGCATGTGTTGCGGTCGTTCGGCGACCTT---GCCGTCGATGCGAAGCAAATA 20920 Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 || || | | ||| || || ||||| |||| ||| || || ||||||| Sbjct 20919 CGAGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGATCGT 20867 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| ||||| || |||||| |||| || || | || Sbjct 1063128 ATGCAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCG 1063069 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | |||||||| || | || || ||||| Sbjct 1063068 GACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAGGGTATTCCCCCAGACCA 1063010 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||||||||| ||| | || || || | ||| || || Sbjct 1063009 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 1062950 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| ||||| ||||| |||| || Sbjct 1062949 CATCCAGAAAGAGTCGACCCTTCACTTGGTGCT 1062917 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| ||||| |||||||| |||| || || | || Sbjct 1305634 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1305575 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| ||||||||| ||| | || || ||||| Sbjct 1305574 GACACGATTGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1305515 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTAT 31369 || ||||| || || || ||||| || | || || | || | || | | ||||| Sbjct 1305514 CAACGTCTTATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACG-CTC-GCG-GATTAC 1305458 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||||| || ||||| || || |||| || Sbjct 1305457 AACATTCAAAAGGAGTCGACCCTCCACTTGGTGCT 1305423 >seq27 Length=880931 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || || |||||| ||||| |||||||| || ||||| ||||||||| |||| || || | Sbjct 149958 AATCAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTC 150017 Query 31249 GTCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 |||||||| |||| | ||||| || ||| | |||||||||||| | || || | Sbjct 150018 GTCCGACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAAGGCATCCCCCCAG 150076 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||| ||||| || || || ||||| ||| | || || || | ||||| Sbjct 150077 ACCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATT 150136 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| ||||| || ||||| || || |||| || Sbjct 150137 ACAACATCCAAAAGGAGTCGACCCTCCACTTGGTCCT 150173 >seq10 Length=1588530 Score = 107 bits (118), Expect = 2e-18 Identities = 169/239 (71%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253 ||||||| ||||| ||||| || || ||||| || |||||| |||| || || |||||| Sbjct 1351188 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1351129 Query 31254 ACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | ||||| || ||| | |||||||||||| | || || |||||| Sbjct 1351128 ACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAAGGCATCCCCCCAGACCAG 1351070 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || ||||| ||| | || || || | |||||| ||| Sbjct 1351069 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 1351010 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 || ||||| || ||||| || || |||| || | ||| | || ||| ||||||| Sbjct 1351009 ATCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAGAAGCG 1350951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766193833040