Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq26 120 5e-22
>seq26
Length=1828681
Score = 120 bits (132), Expect = 5e-22
Identities = 348/531 (66%), Gaps = 6/531 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| |||||| || | | ||| | || || |||||| | | ||||| |||| | ||
Sbjct 21250 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAA--CAATACCGCGC 21307
Query 96867 --TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
||||| || || ||||| || || || || || | || ||||| | || ||||
Sbjct 21308 GCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCTT 21367
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||||| ||||| ||||| || | || | ||||| ||| ||| || || | |
Sbjct 21368 GGCACGCCGACGTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 21427
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044
| || | || | || | ||| |||||| | || ||| | |||||| |||| ||| | |
Sbjct 21428 GCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGG 21487
Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104
|| ||| ||||| ||| | ||||||| | | ||||| || ||| | |
Sbjct 21488 CCGCCGGCGACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATG 21547
Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGA 97163
|||||||||| ||| || | | ||||| | |||||||| | | ||||||
Sbjct 21548 GCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA 21607
Query 97164 GTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223
|| || | | | || ||| | || || | ||| ||||| || || || | |||
Sbjct 21608 -TCCCCGCGCAAAAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCG 21666
Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283
| ||| ||||||||||| ||| || || |||||| || | ||||| |||
Sbjct 21667 TTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATC 21726
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
||| || || |||||||| ||||| | |||||| || | |||||||||
Sbjct 21727 AAGTCGTCGAACCTGTGCACCGAAATCATCGAGTACTCCGCGCCGGACGAG 21777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058857260120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |