Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq26 84.2 5e-11 >seq26 Length=1828681 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1302702 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1302761 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1302762 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1302821 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1302822 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1302880 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1302881 CTTGACGAAGATTTGCAT 1302898 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1302930 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1302989 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1302990 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1303049 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1303050 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1303108 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1303109 CTTGACGAAGATTTGCAT 1303126 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| | || || | || || || ||||| || || Sbjct 1303158 GTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGTTGCTTGCCC 1303217 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1303218 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1303277 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1303278 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1303336 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1303337 CTTGACGAAGATTTGCAT 1303354 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| | || || | || || || ||||| || || Sbjct 1303386 GTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGTTGCTTGCCC 1303445 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1303446 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1303505 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1303506 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1303564 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1303565 CTTGACGAAGATTTGCAT 1303582 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1303614 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1303673 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1303674 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1303733 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1303734 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1303792 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1303793 CTTGACGAAGATTTGCAT 1303810 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| | || || | || || || ||||| || || Sbjct 1303842 GTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGTTGCTTGCCC 1303901 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1303902 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1303961 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1303962 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1304020 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1304021 CTTGACGAAGATTTGCAT 1304038 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1304070 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1304129 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1304130 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1304189 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1304190 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1304248 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1304249 CTTGACGAAGATTTGCAT 1304266 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1304298 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1304357 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1304358 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1304417 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1304418 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1304476 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1304477 CTTGACGAAGATTTGCAT 1304494 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1304526 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1304585 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1304586 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1304645 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1304646 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1304704 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1304705 CTTGACGAAGATTTGCAT 1304722 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1304754 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1304813 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1304814 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1304873 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1304874 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1304932 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1304933 CTTGACGAAGATTTGCAT 1304950 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1304982 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1305041 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1305042 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1305101 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1305102 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1305160 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1305161 CTTGACGAAGATTTGCAT 1305178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397854165196