Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq10 181 2e-41 seq23 158 2e-34 >seq10 Length=1588530 Score = 181 bits (200), Expect = 2e-41 Identities = 160/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||| ||||| |||||||||||||| Sbjct 893295 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGTCGTGGTGGT 893236 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || ||| |||| ||||||| || | || |||||||||||||| Sbjct 893235 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACCCGAGGCGTCCTGAAGATCTTCCTC 893176 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 893175 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 893116 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 893115 TCGCTCGATGTCGTCTACGC 893096 Score = 174 bits (192), Expect = 2e-39 Identities = 180/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||| || || ||||||||||| |||||||| ||||| || ||||||||||| Sbjct 1424250 CGTGACAACATTCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCACGTCGTGGTGGT 1424191 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 1424190 GTGAAGCGTATCTCCGGCCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 1424131 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| |||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1424130 GAGAACGTGATCCGTGATTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1424071 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || |||| || ||||| | | | || ||||| || Sbjct 1424070 TCGCTCGATGTCGTCTACGCCCTGAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1424015 Score = 159 bits (176), Expect = 5e-35 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || || || ||||| || ||||||||||| Sbjct 1346580 CGTGACAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCACGTCGTGGTGGT 1346639 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 1346640 GTGAAGCGTATCTCCGGCCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 1346699 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| || | || ||| ||||||||||| || || ||||| |||||| Sbjct 1346700 GAGAACGTCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1346759 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || |||| || ||||| | | | || ||||| || Sbjct 1346760 TCGCTCGATGTCGTCTACGCCCTGAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1346815 >seq23 Length=3230111 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1242778 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1242719 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||||||| Sbjct 1242718 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTCCTC 1242659 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| ||||| Sbjct 1242658 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACT 1242599 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 1242598 TCGCTCGATGTCGTCTACGC 1242579 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1292551 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1292610 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||||||| Sbjct 1292611 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTCCTC 1292670 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| ||||| Sbjct 1292671 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACT 1292730 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 1292731 TCGCTCGATGTCGTCTACGC 1292750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075166170641