Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq10 116 3e-21
seq27 104 2e-17
>seq10
Length=1588530
Score = 116 bits (128), Expect = 3e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 24997 CAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGT 25056
|| ||||||| || || ||||| | || || || ||||||| |||| || |||||||
Sbjct 1351191 CAGTGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGT 1351132
Query 25057 CTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
| ||||| ||||| | ||| || ||| ||||| ||||| || || || ||||
Sbjct 1351131 CCGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACC 1351072
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||||||||| || | || |||| ||||| | | ||||||||
Sbjct 1351071 AGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 1351012
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || ||||| || || ||||| || || |||||
Sbjct 1351011 ACATCCAAAAGGAGTCGACGCTCCACTTGGTGCT 1350978
>seq27
Length=880931
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 25001 GCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGA 25060
|||||| || || |||||| | || || || | ||||| |||| || |||||||| ||
Sbjct 149964 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 150023
Query 25061 CACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACA 25120
||| ||||| | ||| || ||| ||||| ||||| || || || ||||| ||
Sbjct 150024 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCA 150083
Query 25121 GCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATAT 25180
|| | || ||||||||||| || | || |||| ||||| | | ||||||||| ||
Sbjct 150084 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACAT 150143
Query 25181 TCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || || || ||
Sbjct 150144 CCAAAAGGAGTCGACCCTCCACTTGGTCCT 150173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327804596155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |