Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq26 376 5e-99
seq33 129 1e-24
seq10 87.8 3e-12
>seq26
Length=1828681
Score = 376 bits (416), Expect = 5e-99
Identities = 869/1295 (67%), Gaps = 32/1295 (2%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 22076 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 22017
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| |||||| ||||||| || || ||||| |||||||||
Sbjct 22016 GAATCGAACGGCATCGCCAAGGCCATGAATGCGTCGGCGAGACCTTGCACTCCGATGCCG 21957
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| || ||| |||||||| |||| ||||
Sbjct 21956 ATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTAACGTCA 21897
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| |||| || ||||||
Sbjct 21896 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTTCTTGAAGTCG 21837
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 21836 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 21795
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||||||||| ||| |||| || ||||| || || |||||||| |||||
Sbjct 21794 AAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTTC 21735
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||| ||||| |||| || || || || || ||| |||||||||||||
Sbjct 21734 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAG 21675
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869
|||||||| || ||||| |||| |||||| |||| | ||| || ||| || |
Sbjct 21674 AGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGC-GTACCAAAGCTTTTG 21616
Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929
|| || |||| | || |||||| ||||| | ||||||| |||
Sbjct 21615 CGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAA 21556
Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989
||| ||| | || |||| ||||||||| || ||||| | || ||| ||
Sbjct 21555 CTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGGGGCCAGTC 21496
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
|||| || ||| ||| | || ||||||||| |||||||||||||| || |||||| ||
Sbjct 21495 GCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATC 21436
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | || ||| ||| |||||| | || |||| || |||||||||||
Sbjct 21435 ACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTC 21376
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
| ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||||
Sbjct 21375 GGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 21316
Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
|| | | || |||| ||| || || | || || |||||||| |||| |||
Sbjct 21315 GACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 21256
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||| ||||| |||||| | ||| | | | || |||| |||| || || | ||
Sbjct 21255 GTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACC 21196
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
|||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 21195 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGA 21136
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
|| |||||| ||| ||| ||||| || || ||||| || | || | | | |||
Sbjct 21135 ATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 21076
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAG 245469
||| || || || |||||||||||||||||| ||| | || ||||| ||| |
Sbjct 21075 GAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGACTGCA- 21017
Query 245470 CAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG- 245526
||| ||| ||||||| || |||||||| | |||| | |||||| |||| ||
Sbjct 21016 -AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGC 20958
Query 245527 GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584
|| ||| ||| | | || | ||| | |||| || ||||||||||||||||||
Sbjct 20957 GGTCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCGTCTTG 20901
Query 245585 AACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCG 245644
|| |||||||| |||||| || ||| | || | ||||| || ||| | |||
Sbjct 20900 AAGCCAAAGTAGTTGTAGCCGAAATCGCGATCGTAGATAACGGCGCTGTTGAGGCGGTCG 20841
Query 245645 GCG-TGCTTCTGACTGACCTCGTAAAACTTTTGCG 245678
||| || ||| |||||||||| || |||||
Sbjct 20840 GCGTTGGCCATGA-TGACCTCGTATGTCTCTTGCG 20807
Score = 84.2 bits (92), Expect = 4e-11
Identities = 170/252 (67%), Gaps = 13/252 (5%)
Strand=Plus/Minus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| |||||| || | ||||||||||| || | || |||||||||||| || ||
Sbjct 22928 ACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACATGCCCGTTTTC 22869
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
||||| | |||| ||| || |||||| | ||| || | | |||| |
Sbjct 22868 AGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATC-----------G 22820
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
||| |||| ||| || |||||| || || |||||||| ||||| | || ||
Sbjct 22819 TCGGGCTCG-ACAAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGGTCG 22761
Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976
|||| || | |||| | ||| || || | ||| | | ||||||||||||| ||||
Sbjct 22760 GCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTGTAGATGGCCTTG 22701
Query 243977 AGGT-GCTCGGG 243987
|| | |||||||
Sbjct 22700 AGATCGCTCGGG 22689
>seq33
Length=986392
Score = 129 bits (142), Expect = 1e-24
Identities = 189/263 (72%), Gaps = 11/263 (4%)
Strand=Plus/Plus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | ||||| |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 95606 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 95665
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 95666 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 95725
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG-GGC---CATCATCACGGA 42919
|| ||||||| || ||| |||| || ||| ||| |||||||| |||
Sbjct 95726 TC---CCACCTCGAGC-GAAGACCTC---ACCCCGACACCGTGGCGCTCATCATCAAGGA 95778
Query 42920 GGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCAT 42979
||||||||| ||||| ||||| ||| | || || | || ||| || |||||||
Sbjct 95779 GGCCGTGGAAATCGAAAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCAT 95838
Query 42980 GAACCACGACCTCATGTGCAAGT 43002
||| | ||||||||| |||
Sbjct 95839 GAATGCGAAGCTCATGTGCCAGT 95861
>seq10
Length=1588530
Score = 87.8 bits (96), Expect = 3e-12
Identities = 172/247 (70%), Gaps = 13/247 (5%)
Strand=Plus/Minus
Query 42741 TCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCAC 42799
|| ||| |||||||||||||||| ||||||||| | ||| || ||||| || ||| |
Sbjct 315634 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAGAAACGAGGCCTC-ATGCCTGGCCTCTC 315576
Query 42800 CTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCT 42859
||||| ||||| ||||| | ||||| || || |||| || || || ||| |
Sbjct 315575 TTTCTCCAACGAGCTCATTTCGCGCGACGAAGGTCTTCATACCGAATTCGCGGTGCTCTT 315516
Query 42860 GTTCTCGAGCCACCTCAGGCACAAGCCCTCG--AAGGAGCGGGTC--CGGGCCATCATCA 42915
|||| ||||| || | || || || | ||||| || | ||| ||| | |
Sbjct 315515 GTTC---AGCCATCTGAA-CAAGAGACCAGGTCAAGGATTGGTGCATCGG---ATCGTGA 315463
Query 42916 CGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCG 42975
|||||| || || ||||||||||| ||| | || || | ||||||||| | ||| | |
Sbjct 315462 AGGAGGCGGTTGATATCGAGAAGGAATTCTTGACCGAGGCTCTGCCCGTGGCGCTGATTG 315403
Query 42976 GCATGAA 42982
| |||||
Sbjct 315402 GTATGAA 315396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338763243120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |