Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq26 188 9e-43
seq10 100 3e-16
seq33 87.8 2e-12
>seq26
Length=1828681
Score = 188 bits (208), Expect = 9e-43
Identities = 561/856 (66%), Gaps = 11/856 (1%)
Strand=Plus/Minus
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
||||| || |||| || || || | | ||| ||| | | |||||| || |||||
Sbjct 21806 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCG 21747
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| |||| || || ||| || ||||| | ||||||||| || || || ||||
Sbjct 21746 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 21687
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|| |||||||| |||||| | || | || || || |||| || |||||| || | |
Sbjct 21686 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTAC 21627
Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 21626 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 21568
Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768
||||| |||||||| || | || ||| || || || | | ||||||||
Sbjct 21567 CAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 21508
Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828
|| | ||| | || | |||| || |||| ||||||||| || ||||||||||| ||
Sbjct 21507 CAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGC 21448
Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888
|||||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 21447 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 21388
Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945
|| | || || |||||||| || || ||||| | ||||| | || |||
Sbjct 21387 CTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 21328
Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| | |||| || || | ||| || || | || || ||||| || | ||| ||
Sbjct 21327 GCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCC 21268
Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063
| || | ||| || || || ||| || ||| | | || | || | ||||||
Sbjct 21267 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTGGATG 21210
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
|| ||| ||||| || || ||| ||||| |||||||| | |||| || |||||
Sbjct 21209 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 21150
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || |||||||| ||| |||| | | || |||||||| ||| | || ||
Sbjct 21149 ATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGA 21090
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243
|| || || ||||||||||| || || | |||||| | || | | |||||
Sbjct 21089 GGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGG 21030
Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302
| ||| | || ||||||| || | ||||| | ||||| || |||| | ||| |||||
Sbjct 21029 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 20971
Query 115303 AAACATGTATTGGGGT 115318
| ||||| ||| |||
Sbjct 20970 GAGCATGTGTTGCGGT 20955
>seq10
Length=1588530
Score = 100 bits (110), Expect = 3e-16
Identities = 298/451 (66%), Gaps = 18/451 (4%)
Strand=Plus/Minus
Query 172577 TTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAA 172636
||||| | ||| || | |||| | || | || | ||| |||||||| ||||| ||
Sbjct 564769 TTGAGCAAGGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGAT 564710
Query 172637 CCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCT 172696
||||||| ||| ||| | ||| ||||| ||| || || || ||| | || ||
Sbjct 564709 CCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCG 564650
Query 172697 TGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTT 172756
|| | || ||||| || ||||| ||||||| ||||| | ||||| ||| || |
Sbjct 564649 GTGTAAACTTTGCCCTGCTGCAGACCTAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT 564592
Query 172757 GATGT-GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGG 172812
||| ||| | || | | || || || || || ||| || || | |||
Sbjct 564591 --TGTCGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGTAGCTTTCCTCGCAAAGG 564534
Query 172813 GAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGC 172872
||| ||||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||
Sbjct 564533 GAAGACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGC 564474
Query 172873 GGAATCACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTG 172930
|||||| || || |||| |||||| || ||||| || | | | ||| || || ||
Sbjct 564473 GGAATCTCCTTCGGTCAAGATGAGTGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTA 564416
Query 172931 TTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTC 172987
|||||||| || | |||| | ||| || || || |||| | || || |||
Sbjct 564415 TTCGCATCTTCGAGCTTGACGAGACCCGTGATACGCGATCGCTTGTGT---CCGTCCGTC 564359
Query 172988 TTCTTGAGTTCCTTCATCTCCTTGAACTTGG 173018
|||||||| || || |||||||||||
Sbjct 564358 TTCTTGAGCATCTGGTCCTGCTTGAACTTGG 564328
>seq33
Length=986392
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| || || || |||||||| ||| || || || || ||||||| ||| |
Sbjct 272632 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 272573
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645
|| |||||||| || || || ||| || ||| | ||| | || ||| ||||
Sbjct 272572 ACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 272513
Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705
||||| ||||| || || || | | | |||||| |||||| |||||||||||||||
Sbjct 272512 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 272453
Query 8706 TCACCCCGTCGTGGCC 8721
|| |||||||||||||
Sbjct 272452 TCCCCCCGTCGTGGCC 272437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353323723960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |