Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq26 100 3e-16
seq27 96.9 3e-15
seq10 93.3 4e-14
>seq26
Length=1828681
Score = 100 bits (110), Expect = 3e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || |||||||| | |||||| | || || || || ||||| ||||| || |||||
Sbjct 1064039 ATACCACCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCT 1064098
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| || | ||| || || || | || | ||||| ||||| ||
Sbjct 1064099 GCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGG 1064158
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||| || || ||||| || || |||| || | || | ||||| ||||||||
Sbjct 1064159 GGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAGACTC 1064217
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||| ||||| || | || ||||| || || || || ||||| || ||||||
Sbjct 1064218 GACCTCGAGTGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCATC 1064269
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/235 (70%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 45109 TTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATA 45166
||||| || || ||||| | | ||| | || || || || || || ||||| || ||
Sbjct 1062895 TTATTGACCACCACGGAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTA 1062954
Query 45167 ATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTC 45226
||| || || ||| || | || || || ||| | |||||||| ||||||||
Sbjct 1062955 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTC 1063014
Query 45227 CGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAG 45285
|| ||||| || || || ||||| || || |||| || | || | ||||| ||||
Sbjct 1063015 TGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAG 1063073
Query 45286 ACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||| ||||| || | || ||||| || || || || ||||| ||||||||
Sbjct 1063074 ACTCGACCTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1063128
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | || || || || ||||| ||||| || |||||
Sbjct 1063127 ATACCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCT 1063186
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| || | ||| || || || | || | ||||| ||||| ||
Sbjct 1063187 GCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGG 1063246
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||| || || |||||||| || |||| || | || | ||||| ||||||||
Sbjct 1063247 GGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCTGAAGACTC 1063305
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||| || | || |||||||| | || || ||||| ||||||||
Sbjct 1063306 GACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1063356
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/172 (73%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647
||| |||| | || ||||||||||| | |||| |||||||||||| |||||| |||
Sbjct 21634 ATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAAC 21693
Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAAT-GTAGTAATCTTTGCTCCGAAAT 123706
| |||| | || || | ||| | || || || || | || | || || ||| |||||||
Sbjct 21694 AAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCG-AACCTGTGCACCGAAAT 21752
Query 123707 TATCGAATACAGCGATGCCGATCAAGTG-GCCGTGTGTAATTTGGCTTCGAT 123757
||||| ||| || |||| | |||| ||||| || || ||||| |||||
Sbjct 21753 CATCGAGTACTCCG-CGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGAT 21803
>seq27
Length=880931
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || |||||| || || ||| || | ||
Sbjct 150164 TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGC 150105
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | ||||||||||| || || |||||||| || ||||| || ||
Sbjct 150104 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTG 150045
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | |||||||| |||||||| ||||| || | ||| ||||| ||
Sbjct 150044 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 149986
Query 45317 TAGAGTTTTTACAAAAATTTGC 45338
||||| || || || ||||||
Sbjct 149985 AAGAGTCTTGACGAAGATTTGC 149964
>seq10
Length=1588530
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| ||||| || ||||||||||| || |||||| || || ||| || | ||
Sbjct 1350987 TGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGC 1351046
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | ||||||||||| || || |||||||| || ||||| || ||
Sbjct 1351047 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTG 1351106
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | |||||||| |||||||| ||||| || | || ||||| ||
Sbjct 1351107 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1351165
Query 45317 TAGAGTTTTTACAAAAATTTGCA 45339
|| || || || || |||||||
Sbjct 1351166 GAGGGTCTTGACGAAGATTTGCA 1351188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002990948520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |