Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq26 102 1e-16
>seq26
Length=1828681
Score = 102 bits (112), Expect = 1e-16
Identities = 344/530 (65%), Gaps = 12/530 (2%)
Strand=Plus/Minus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||| || || ||| |||||| || | | || |||||||| || | | | | ||
Sbjct 21477 CTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 21418
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284
| || ||||||| | |||||| | | | |||||||||||| ||||| |
Sbjct 21417 CTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAG 21358
Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344
| | || | || || || | |||||| ||||| ||||| || ||| | |
Sbjct 21357 GTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTATT 21298
Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404
|||| | || || ||||| || || | ||||| | | |||||||||| | ||||
Sbjct 21297 GTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTA 21238
Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGAT 205464
||||| || | | |||| |||| | || || || || | ||||| |||
Sbjct 21237 AGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGAT 21178
Query 205465 CTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523
| |||||| ||||| || ||| |||||||||| |||| ||||| ||| || || |
Sbjct 21177 GAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTGA 21119
Query 205524 CCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582
|||| ||||||| | |||| || || || || |||| |||||| || || |
Sbjct 21118 CCAGGAAGCACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGTGTCGGCGAG 21060
Query 205583 GCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCAG 205638
|||||| | ||| | ||||| ||| |||| | || || |||| ||| |
Sbjct 21059 GCGTGGGTAAAG----TAGCGCTCCGACATGAGGTTGTACGACTGCAAGACGCGCTCGAT 21004
Query 205639 ATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTC 205688
||| ||||| || || | ||||| | ||||| | |||||| ||||
Sbjct 21003 GTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGTC 20954
Score = 87.8 bits (96), Expect = 3e-12
Identities = 160/228 (70%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895
|||||| || || ||||||| || || ||||| | || | | || ||||||||
Sbjct 22938 GTCTTGGTCGACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACAT 22879
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954
||| || || || || || ||| ||||| | |||||| || | |||| || |||
Sbjct 22878 GCCCGTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGT 22819
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
||| ||| | | ||| ||||| || || || ||||||||| ||||| || || ||
Sbjct 22818 CGGGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCACCTCGGTCG 22761
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|||| || | || |||||||| ||||| | |||||| || ||||||
Sbjct 22760 GCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTG 22713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154832240720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |