Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq26 102 1e-16 >seq26 Length=1828681 Score = 102 bits (112), Expect = 1e-16 Identities = 344/530 (65%), Gaps = 12/530 (2%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| |||||| || | | || |||||||| || | | | | || Sbjct 21477 CTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 21418 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284 | || ||||||| | |||||| | | | |||||||||||| ||||| | Sbjct 21417 CTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAG 21358 Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 21357 GTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTATT 21298 Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404 |||| | || || ||||| || || | ||||| | | |||||||||| | |||| Sbjct 21297 GTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTA 21238 Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGAT 205464 ||||| || | | |||| |||| | || || || || | ||||| ||| Sbjct 21237 AGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGAT 21178 Query 205465 CTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523 | |||||| ||||| || ||| |||||||||| |||| ||||| ||| || || | Sbjct 21177 GAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTGA 21119 Query 205524 CCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582 |||| ||||||| | |||| || || || || |||| |||||| || || | Sbjct 21118 CCAGGAAGCACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGTGTCGGCGAG 21060 Query 205583 GCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCAG 205638 |||||| | ||| | ||||| ||| |||| | || || |||| ||| | Sbjct 21059 GCGTGGGTAAAG----TAGCGCTCCGACATGAGGTTGTACGACTGCAAGACGCGCTCGAT 21004 Query 205639 ATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTC 205688 ||| ||||| || || | ||||| | ||||| | |||||| |||| Sbjct 21003 GTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGTC 20954 Score = 87.8 bits (96), Expect = 3e-12 Identities = 160/228 (70%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895 |||||| || || ||||||| || || ||||| | || | | || |||||||| Sbjct 22938 GTCTTGGTCGACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACAT 22879 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954 ||| || || || || || ||| ||||| | |||||| || | |||| || ||| Sbjct 22878 GCCCGTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGT 22819 Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013 ||| ||| | | ||| ||||| || || || ||||||||| ||||| || || || Sbjct 22818 CGGGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCACCTCGGTCG 22761 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| || | || |||||||| ||||| | |||||| || |||||| Sbjct 22760 GCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTG 22713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154832240720