Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq12 361 7e-95 seq23 167 3e-36 seq11 132 6e-26 seq36 95.1 2e-14 >seq12 Length=1732111 Score = 361 bits (400), Expect = 7e-95 Identities = 656/959 (68%), Gaps = 3/959 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 407059 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 407118 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 407119 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 407178 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | |||||| || | || | || |||||||| ||| Sbjct 407179 ATACGAGTGGAACCACCAACGAGAACGATCTCGTGGACGGAGGCCTTGTCGATCTTGGAG 407238 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||||||||| |||| ||| Sbjct 407239 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCTCGGAACAAGTCTTGGCACAACTCC 407298 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| || || || ||||| || | || ||| | | ||| || || Sbjct 407299 TCGAAGCGGGCACGGGTGATAGAGGTGTAGAAGTCGATACCCTCGAAAAGCGAGTCGATC 407358 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | || ||||| || ||||| || || || || Sbjct 407359 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCGGTGCGG 407418 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 407419 AGACGACGGAGAGCACGGGCGTTCGATGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 407478 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 407479 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 407538 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | || | || ||||| ||||| Sbjct 407539 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGAGACATCGAACGTT 407598 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 407599 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTCTTGTCGAGGCCG 407658 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || || || ||||| || ||| ||||| | || Sbjct 407659 TAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCCCGAGATG 407718 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 407719 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACG 407778 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || ||| | |||||||| ||| || Sbjct 407779 ACGGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCTTTCATCTTGAGCAGG 407838 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | || || || || || || | || || || Sbjct 407839 ATCATGGACGAGATTTCCTCGGGGGTGAATTGCTTGGTCTCGCCTCGGTACTCGACCTCG 407898 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || ||||| || | | | || |||||| | | ||| | ||||| ||| Sbjct 407899 ATGATGGGCTT---GGTTCCCTTGTCGACAACCTTGAAGGGCCAGTGCTTCATGTCGGAC 407955 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| | || | |||||| || || || ||||| ||||| || || ||||| Sbjct 407956 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 408014 >seq23 Length=3230111 Score = 167 bits (184), Expect = 3e-36 Identities = 326/478 (68%), Gaps = 13/478 (3%) Strand=Plus/Minus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| ||||| | ||| | |||||| ||||||||||||| |||| Sbjct 1551662 GTGCGCTTGGCACGCTCGCACGCGGATCGGAGACGACGGAGGGCACGCGGGTCCTCGGAG 1551603 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAAT 7457 || || ||| | || | | |||||| | |||||| || ||| | | | | | Sbjct 1551602 ATGTCGAGCTTGTTCTTCCTCTCAAACTCCTTCTTGAAGTGCTCCAAGAGGGCGTTG--T 1551545 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || |||||||||||||| || || || ||||| || ||||| | |||| ||| | Sbjct 1551544 CAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACGGCGAAGACACCAC 1551485 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||| | || | ||| ||||| || || || || || || || || ||||| ||| Sbjct 1551484 CCGAGATGGTCAAAAGCGAGACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGAACGA 1551425 Query 7578 TCGTATC-------GTCGTCT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628 | | || | | ||| || || | |||||||||| ||||| || || || | Sbjct 1551424 GCTTCTCCTTCTTGGACTTCTCGGTGGCCTCACCGAGACCGTAGGCGATGGCGGCAGCGG 1551365 Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 | || || || || ||||| || || || || || || ||| | || || || |||| Sbjct 1551364 TGGGCTCGTTGATGATACGGAGCACGTCCAAACCGGCGATCGTTCCGGCGTCCTTGGTCG 1551305 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || ||||| ||||| ||||| || ||||| || ||||| || | | |||| | || Sbjct 1551304 AGAGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTAACGACGGCCTTCTTGACCTCCT 1551245 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 | ||||| | | || ||| | || || | |||| || ||||| || || ||||| Sbjct 1551244 TGCCGAGCTTGGTCTCGGCGGTCTCCTTGAGCTTGGAGAGGACCATGGACGAGATCTC 1551187 Score = 102 bits (112), Expect = 1e-16 Identities = 113/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 1550931 CTTGGCCGAGTCACCAATGAGACGCTCTGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1550875 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1550874 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1550815 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACC 8142 ||| || || || ||||| | ||| ||||| Sbjct 1550814 GCAGGAGTAGGTGGTTCCGAGATCGATACC 1550785 >seq11 Length=1812982 Score = 132 bits (146), Expect = 6e-26 Identities = 226/327 (69%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||||||| || || || ||||| || || || |||| ||| Sbjct 74171 TCGAAGTCCTCACCGCCCAAGTGGGTGTCACCGGCGGTGGCCAAAACCTCGAAGACACCG 74112 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 74111 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 74052 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 74051 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 73995 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| | ||| ||| || || || || || || | || || || |||||||||||| Sbjct 73994 TTAACGACACGGAGAACATTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 73935 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| || || ||||| || | Sbjct 73934 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGAGTAACCTTCTTGCCCAAG 73875 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 73874 TAGGCCTCGGCGGTCTCCTTCATCTTG 73848 >seq36 Length=474693 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/369 (66%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||| | || || || || || || || ||| || Sbjct 61708 TTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATCCGAG 61767 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | || || || ||||| |||||||| || || || || || ||| | | ||| | Sbjct 61768 ACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 61827 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| |||| || ||||| ||||| |||||||||| Sbjct 61828 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCA 61886 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | ||| ||||| | || || | | | |||||| | Sbjct 61887 CGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGCTGTCGCCGA 61946 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || ||||| Sbjct 61947 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGATTG 62006 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || || ||||||||||| | ||||||||| || | || ||||| | || || Sbjct 62007 GGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 62066 Query 22803 AGATTTTGT 22811 || ||||| Sbjct 62067 CGACTTTGT 62075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132506251080