Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq12 361 7e-95
seq23 167 3e-36
seq11 132 6e-26
seq36 95.1 2e-14
>seq12
Length=1732111
Score = 361 bits (400), Expect = 7e-95
Identities = 656/959 (68%), Gaps = 3/959 (0%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| || | ||||||||| ||||| | || ||||| || || ||||||||||||||
Sbjct 407059 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 407118
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || || ||||| | | || || | || |||
Sbjct 407119 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 407178
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | |||||| || | || | || |||||||| |||
Sbjct 407179 ATACGAGTGGAACCACCAACGAGAACGATCTCGTGGACGGAGGCCTTGTCGATCTTGGAG 407238
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || || ||||| || ||||| ||||||||||| |||| |||
Sbjct 407239 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCTCGGAACAAGTCTTGGCACAACTCC 407298
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || |||||||| || || || ||||| || | || ||| | | ||| || ||
Sbjct 407299 TCGAAGCGGGCACGGGTGATAGAGGTGTAGAAGTCGATACCCTCGAAAAGCGAGTCGATC 407358
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| ||||| || || || | |||||| | || ||||| || ||||| || || || ||
Sbjct 407359 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCGGTGCGG 407418
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| |||||| || ||||| | ||| || | ||| ||||| | || || || |||||
Sbjct 407419 AGACGACGGAGAGCACGGGCGTTCGATGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 407478
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | ||||| ||||| || ||||| |||||||| || || ||
Sbjct 407479 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 407538
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
||||| || ||||| || |||||||| | || ||| | || | || ||||| |||||
Sbjct 407539 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGAGACATCGAACGTT 407598
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|| || || || || || ||||| |||||| | ||| || | | ||||| ||||| |||
Sbjct 407599 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTCTTGTCGAGGCCG 407658
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || || || ||||| || ||| ||||| | ||
Sbjct 407659 TAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCCCGAGATG 407718
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| ||||| || || |||||||| ||||| ||||| |||||||| ||||| || |||
Sbjct 407719 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACG 407778
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| |||| | ||| || | ||||| || | || ||| | |||||||| ||| ||
Sbjct 407779 ACGGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCTTTCATCTTGAGCAGG 407838
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849
| ||| || || || || || | | || || || || || || | || || ||
Sbjct 407839 ATCATGGACGAGATTTCCTCGGGGGTGAATTGCTTGGTCTCGCCTCGGTACTCGACCTCG 407898
Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909
|| ||||| || | | | || |||||| | | ||| | ||||| |||
Sbjct 407899 ATGATGGGCTT---GGTTCCCTTGTCGACAACCTTGAAGGGCCAGTGCTTCATGTCGGAC 407955
Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968
||||||| | || | |||||| || || || ||||| ||||| || || |||||
Sbjct 407956 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 408014
>seq23
Length=3230111
Score = 167 bits (184), Expect = 3e-36
Identities = 326/478 (68%), Gaps = 13/478 (3%)
Strand=Plus/Minus
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || ||||| ||||| | ||| | |||||| ||||||||||||| ||||
Sbjct 1551662 GTGCGCTTGGCACGCTCGCACGCGGATCGGAGACGACGGAGGGCACGCGGGTCCTCGGAG 1551603
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAAT 7457
|| || ||| | || | | |||||| | |||||| || ||| | | | | |
Sbjct 1551602 ATGTCGAGCTTGTTCTTCCTCTCAAACTCCTTCTTGAAGTGCTCCAAGAGGGCGTTG--T 1551545
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
| || || |||||||||||||| || || || ||||| || ||||| | |||| ||| |
Sbjct 1551544 CAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACGGCGAAGACACCAC 1551485
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| ||| | || | ||| ||||| || || || || || || || || ||||| |||
Sbjct 1551484 CCGAGATGGTCAAAAGCGAGACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGAACGA 1551425
Query 7578 TCGTATC-------GTCGTCT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628
| | || | | ||| || || | |||||||||| ||||| || || || |
Sbjct 1551424 GCTTCTCCTTCTTGGACTTCTCGGTGGCCTCACCGAGACCGTAGGCGATGGCGGCAGCGG 1551365
Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688
| || || || || ||||| || || || || || || ||| | || || || ||||
Sbjct 1551364 TGGGCTCGTTGATGATACGGAGCACGTCCAAACCGGCGATCGTTCCGGCGTCCTTGGTCG 1551305
Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748
| || ||||| ||||| ||||| || ||||| || ||||| || | | |||| | ||
Sbjct 1551304 AGAGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTAACGACGGCCTTCTTGACCTCCT 1551245
Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806
| ||||| | | || ||| | || || | |||| || ||||| || || |||||
Sbjct 1551244 TGCCGAGCTTGGTCTCGGCGGTCTCCTTGAGCTTGGAGAGGACCATGGACGAGATCTC 1551187
Score = 102 bits (112), Expect = 1e-16
Identities = 113/150 (75%), Gaps = 3/150 (2%)
Strand=Plus/Minus
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| |||| ||| || || ||||| || | | | || || ||||| || || |||||
Sbjct 1550931 CTTGGCCGAGTCACCAATGAGACGCTCTGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1550875
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
|| || || || |||||||| || || || || || ||||||||||||||||| |||||
Sbjct 1550874 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1550815
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACC 8142
||| || || || ||||| | ||| |||||
Sbjct 1550814 GCAGGAGTAGGTGGTTCCGAGATCGATACC 1550785
>seq11
Length=1812982
Score = 132 bits (146), Expect = 6e-26
Identities = 226/327 (69%), Gaps = 3/327 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || ||||| |||||||| || || || ||||| || || || |||| |||
Sbjct 74171 TCGAAGTCCTCACCGCCCAAGTGGGTGTCACCGGCGGTGGCCAAAACCTCGAAGACACCG 74112
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | ||| ||||| ||||| || || || || || | | || | |
Sbjct 74111 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 74052
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | | | |||| ||||||||||| ||||| || || || || || ||
Sbjct 74051 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 73995
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|||| | ||| ||| || || || || || || | || || || ||||||||||||
Sbjct 73994 TTAACGACACGGAGAACATTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 73935
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||||||||| || ||||| |||| || || ||||| || |
Sbjct 73934 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGAGTAACCTTCTTGCCCAAG 73875
Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783
|| | || ||| | || ||||| |||
Sbjct 73874 TAGGCCTCGGCGGTCTCCTTCATCTTG 73848
>seq36
Length=474693
Score = 95.1 bits (104), Expect = 2e-14
Identities = 244/369 (66%), Gaps = 2/369 (1%)
Strand=Plus/Plus
Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503
|| || || || || || || ||| | || || || || || || || ||| ||
Sbjct 61708 TTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATCCGAG 61767
Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562
| || || || ||||| |||||||| || || || || || ||| | | ||| |
Sbjct 61768 ACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 61827
Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622
| || || || | || || |||| |||| || ||||| ||||| ||||||||||
Sbjct 61828 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCA 61886
Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682
||| || ||| | || ||| | ||| ||||| | || || | | | |||||| |
Sbjct 61887 CGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGCTGTCGCCGA 61946
Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742
||| ||| |||| | || | ||||| || ||| | || || || || |||||
Sbjct 61947 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGATTG 62006
Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802
||| || || ||||||||||| | ||||||||| || | || ||||| | || ||
Sbjct 62007 GGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 62066
Query 22803 AGATTTTGT 22811
|| |||||
Sbjct 62067 CGACTTTGT 62075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132506251080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |