Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq26 152 6e-32 seq36 145 9e-30 seq10 131 2e-25 seq33 104 3e-17 >seq26 Length=1828681 Score = 152 bits (168), Expect = 6e-32 Identities = 517/798 (65%), Gaps = 17/798 (2%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| ||||| |||| ||||| || | || || || || ||| || Sbjct 20963 ACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGT 21022 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||| || ||||| | | || || | |||||| | || || ||||||||||| Sbjct 21023 CGTACAACCTCATGTCGGAGCGCTACTTT-ACCCACGCCTCGCCGACACTCTTCAACGCC 21081 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 || || || || || | || || ||||| | | | ||||| ||||| ||| Sbjct 21082 GGAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATC 21141 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | ||||| |||| ||| |||| || || | ||||| ||| || ||||||||| Sbjct 21142 GAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATC 21201 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917 || || |||||| | || | || | | ||| || || || || || | Sbjct 21202 GGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTAC 21261 Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977 || | || || | || ||||| || || | ||| || |||||||| || ||||| Sbjct 21262 TCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAA 21321 Query 111978 GCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 112031 | ||| ||||| | ||| | |||| |||| || ||||| |||||||| || Sbjct 21322 GGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGAC 21378 Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCGCG 112089 || | |||||||| || | || ||||| || | ||||| | |||| | || | Sbjct 21379 GTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCT--CGTG 21436 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 ||||||||| || |||||||| || |||||||||||| || |||| |||| ||| Sbjct 21437 ATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCG 21496 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 | ||| | || || || || | | | || ||||| ||| ||| | || || |||| Sbjct 21497 ACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGT 21556 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269 | ||||| | | || ||||| | || | || || | |||| | || || | Sbjct 21557 TCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC-G 21615 Query 112270 CCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328 | | | | ||| | || |||||| || | || ||| || || | || | ||||| Sbjct 21616 CAAAAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTC 21675 Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388 ||||| |||||| ||| | || || |||||||| | || ||||||| || Sbjct 21676 TACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCG 21735 Query 112389 AACCTCTGTACAGAAATC 112406 ||||| || || |||||| Sbjct 21736 AACCTGTGCACCGAAATC 21753 >seq36 Length=474693 Score = 145 bits (160), Expect = 9e-30 Identities = 268/393 (68%), Gaps = 0/393 (0%) Strand=Plus/Plus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| |||||||| | || ||| ||| ||| ||||| ||| | || ||| Sbjct 61704 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATC 61763 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| || || ||||||||| | ||| | || || Sbjct 61764 CGAGACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 61823 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| ||| ||| | ||||| Sbjct 61824 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 61883 Query 13772 CCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGGGTATCAA 13831 ||| || || ||| | || ||| ||||||||| | ||||||| || | | || Sbjct 61884 CCACGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGCTGTCGC 61943 Query 13832 ACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGA 13891 | ||| | ||| || |||| | | | | | || ||| | | || || | || Sbjct 61944 CGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGA 62003 Query 13892 TTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGC 13951 |||||| |||||| || || || || | ||||||| | ||||| || ||||| | Sbjct 62004 TTGGGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCC 62063 Query 13952 CGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984 |||||| | ||| | || |||||||||||||| Sbjct 62064 CGACGACTTTGTCCTCGCGACGGGTGAGACCCA 62096 >seq10 Length=1588530 Score = 131 bits (144), Expect = 2e-25 Identities = 236/337 (70%), Gaps = 10/337 (3%) Strand=Plus/Minus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || |||||||||||||| || || |||| ||| ||| | |||||||||||| Sbjct 564736 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 564677 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 || || || ||| | || || || | || ||||| || ||||| |||||| Sbjct 564676 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCTAAGATC 564617 Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCACGA 176899 | ||||| ||| ||||| ||| || ||| | | || | || | | || ||||| Sbjct 564616 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 564560 Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959 || || ||| || || | |||||||||||| |||| || ||||| || |||| Sbjct 564559 ACGTTGAGTAGCTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 564500 Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019 ||||||| || ||||||| || || ||||| || || |||| ||||||||| |||||| Sbjct 564499 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGTGTGCACTTG 564440 Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054 || | | | |||||| || || |||||||| || Sbjct 564439 GACCCGTTCCT--CGTACCAGCGTTATTCGCATCTTC 564405 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 102222 TCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 102281 || || |||||| | | || | |||||||||||| ||||| |||||||| || |||| Sbjct 315634 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAGAAACGAGGCCTCATGCCTGGCCTCTCT 315575 Query 102282 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335 |||||||||||||| || || || ||||| || || || || || |||||| Sbjct 315574 TTCTCCAACGAGCTCATTTCGCGCGACGAAGGTCTTCATACCGAATTCGCGGTG 315521 >seq33 Length=986392 Score = 104 bits (114), Expect = 3e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| || ||||| ||| | || || Sbjct 272639 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 272580 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| || ||| |||||||||| | ||| | || || Sbjct 272579 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 272520 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| ||| ||||||||||| Sbjct 272519 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 272460 Query 13772 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 13816 ||| || || || | || || ||| |||||| |||| ||||| Sbjct 272459 CCACGAGTCCCCCCGTCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 272415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742112906640