Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq26 152 6e-32
seq36 145 9e-30
seq10 131 2e-25
seq33 104 3e-17
>seq26
Length=1828681
Score = 152 bits (168), Expect = 6e-32
Identities = 517/798 (65%), Gaps = 17/798 (2%)
Strand=Plus/Plus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
||||| ||||||| ||||| |||| ||||| || | || || || || ||| ||
Sbjct 20963 ACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGT 21022
Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737
| ||| || ||||| | | || || | |||||| | || || |||||||||||
Sbjct 21023 CGTACAACCTCATGTCGGAGCGCTACTTT-ACCCACGCCTCGCCGACACTCTTCAACGCC 21081
Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797
|| || || || || | || || ||||| | | | ||||| ||||| |||
Sbjct 21082 GGAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATC 21141
Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857
| ||||| |||| ||| |||| || || | ||||| ||| || |||||||||
Sbjct 21142 GAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATC 21201
Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917
|| || |||||| | || | || | | ||| || || || || || |
Sbjct 21202 GGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTAC 21261
Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977
|| | || || | || ||||| || || | ||| || |||||||| || |||||
Sbjct 21262 TCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAA 21321
Query 111978 GCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 112031
| ||| ||||| | ||| | |||| |||| || ||||| |||||||| ||
Sbjct 21322 GGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGAC 21378
Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCGCG 112089
|| | |||||||| || | || ||||| || | ||||| | |||| | || |
Sbjct 21379 GTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCT--CGTG 21436
Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149
||||||||| || |||||||| || |||||||||||| || |||| |||| |||
Sbjct 21437 ATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCG 21496
Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209
| ||| | || || || || | | | || ||||| ||| ||| | || || ||||
Sbjct 21497 ACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGT 21556
Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269
| ||||| | | || ||||| | || | || || | |||| | || || |
Sbjct 21557 TCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC-G 21615
Query 112270 CCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328
| | | | ||| | || |||||| || | || ||| || || | || | |||||
Sbjct 21616 CAAAAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTC 21675
Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388
||||| |||||| ||| | || || |||||||| | || ||||||| ||
Sbjct 21676 TACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCG 21735
Query 112389 AACCTCTGTACAGAAATC 112406
||||| || || ||||||
Sbjct 21736 AACCTGTGCACCGAAATC 21753
>seq36
Length=474693
Score = 145 bits (160), Expect = 9e-30
Identities = 268/393 (68%), Gaps = 0/393 (0%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| ||| ||||| ||| | || |||
Sbjct 61704 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATC 61763
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || || ||||||||| | ||| | || ||
Sbjct 61764 CGAGACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 61823
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| ||| | |||||
Sbjct 61824 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 61883
Query 13772 CCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGGGTATCAA 13831
||| || || ||| | || ||| ||||||||| | ||||||| || | | ||
Sbjct 61884 CCACGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGCTGTCGC 61943
Query 13832 ACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGA 13891
| ||| | ||| || |||| | | | | | || ||| | | || || | ||
Sbjct 61944 CGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGA 62003
Query 13892 TTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGC 13951
|||||| |||||| || || || || | ||||||| | ||||| || ||||| |
Sbjct 62004 TTGGGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCC 62063
Query 13952 CGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
|||||| | ||| | || ||||||||||||||
Sbjct 62064 CGACGACTTTGTCCTCGCGACGGGTGAGACCCA 62096
>seq10
Length=1588530
Score = 131 bits (144), Expect = 2e-25
Identities = 236/337 (70%), Gaps = 10/337 (3%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 564736 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 564677
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || || | || ||||| || ||||| ||||||
Sbjct 564676 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCTAAGATC 564617
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCACGA 176899
| ||||| ||| ||||| ||| || ||| | | || | || | | || |||||
Sbjct 564616 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 564560
Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959
|| || ||| || || | |||||||||||| |||| || ||||| || ||||
Sbjct 564559 ACGTTGAGTAGCTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 564500
Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019
||||||| || ||||||| || || ||||| || || |||| ||||||||| ||||||
Sbjct 564499 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGTGTGCACTTG 564440
Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054
|| | | | |||||| || || |||||||| ||
Sbjct 564439 GACCCGTTCCT--CGTACCAGCGTTATTCGCATCTTC 564405
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 102222 TCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 102281
|| || |||||| | | || | |||||||||||| ||||| |||||||| || ||||
Sbjct 315634 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAGAAACGAGGCCTCATGCCTGGCCTCTCT 315575
Query 102282 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335
|||||||||||||| || || || ||||| || || || || || ||||||
Sbjct 315574 TTCTCCAACGAGCTCATTTCGCGCGACGAAGGTCTTCATACCGAATTCGCGGTG 315521
>seq33
Length=986392
Score = 104 bits (114), Expect = 3e-17
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 272639 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 272580
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || ||| |||||||||| | ||| | || ||
Sbjct 272579 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 272520
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| |||||||||||
Sbjct 272519 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 272460
Query 13772 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 13816
||| || || || | || || ||| |||||| |||| |||||
Sbjct 272459 CCACGAGTCCCCCCGTCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 272415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742112906640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |