Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq26 100 2e-16 seq10 91.5 1e-13 seq27 86.0 4e-12 >seq26 Length=1828681 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| ||||| ||||| | || | || |||| || Sbjct 1062920 ACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1062979 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| Sbjct 1062980 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 1063039 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 1063040 ATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTG 1063099 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||| |||||||| |||||| Sbjct 1063100 CCCGTCAGCGTCTTGACAAAGATTTGCATA 1063129 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1302914 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1302973 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1302974 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1303033 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1303034 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1303093 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1303094 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1303127 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1303598 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1303657 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1303658 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1303717 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1303718 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1303777 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1303778 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1303811 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1304054 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1304113 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1304114 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1304173 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1304174 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1304233 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1304234 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304267 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1304282 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1304341 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1304342 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1304401 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1304402 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1304461 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1304462 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304495 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1304510 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1304569 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1304570 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1304629 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1304630 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1304689 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1304690 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304723 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1304738 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1304797 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1304798 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1304857 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1304858 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1304917 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1304918 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304951 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1304966 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1305025 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1305026 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1305085 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1305086 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1305145 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1305146 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1305179 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| || || | || | || |||| Sbjct 1064056 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATC 1064115 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || || || ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1064116 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1064175 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | |||| || | ||| || |||| || ||||| Sbjct 1064176 TTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGTGTGATGGT 1064235 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || ||||| |||||||||||||| Sbjct 1064236 CTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 1064268 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 1302690 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1302749 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| | Sbjct 1302750 AGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1302809 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | |||| || || ||| || |||| || || || || Sbjct 1302810 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1302869 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || ||||| |||||| Sbjct 1302870 CCGGTCAAGGTCTTGACGAAGATTTGCATA 1302899 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || || |||||||| ||||| | || | || |||| Sbjct 1305194 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1305253 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || || || ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1305254 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1305313 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | |||| || || ||| || |||| || || || Sbjct 1305314 CTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1305373 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| |||||||| |||||| Sbjct 1305374 CTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 1305407 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| || || | || | || |||| || Sbjct 1063148 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCCTCG 1063207 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || || ||||| || || ||||| |||||| | || | ||||||||||| | Sbjct 1063208 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGA 1063267 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || ||||| || Sbjct 1063268 ATCTTGGTCTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTG 1063327 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| |||||||| |||||| Sbjct 1063328 CCGGTCAAGGTCTTGACAAAGATTTGCATA 1063357 >seq10 Length=1588530 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| || || | || | || |||| || Sbjct 1350981 ACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 1351040 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || |||||||||||| | || | || |||||||| Sbjct 1351041 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 1351100 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| ||||| || Sbjct 1351101 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 1351160 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCA 34980 |||||||| ||||| || ||||| |||| Sbjct 1351161 CCCGTGAGGGTCTTGACGAAGATTTGCA 1351188 >seq27 Length=880931 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| || || | || | || |||| || Sbjct 150170 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 150111 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || |||||||||||| | || | || |||||||| Sbjct 150110 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 150051 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 150050 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 149991 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGC 34979 ||||| |||||||| || ||||| ||| Sbjct 149990 CCCGTAAGAGTCTTGACGAAGATTTGC 149964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633453610536