Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq26 98.7 8e-16 >seq26 Length=1828681 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| |||||||| ||||| || | Sbjct 1303128 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1303187 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | ||||| || ||||| || || || ||||| || | |||| Sbjct 1303188 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303247 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1303248 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303307 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1303308 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303354 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| |||||||| ||||| || | Sbjct 1303356 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1303415 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | ||||| || ||||| || || || ||||| || | |||| Sbjct 1303416 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303475 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1303476 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303535 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1303536 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303582 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| |||||||| ||||| || | Sbjct 1303812 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1303871 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | ||||| || ||||| || || || ||||| || | |||| Sbjct 1303872 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303931 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1303932 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303991 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1303992 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304038 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1302900 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1302959 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1302960 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303019 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1303020 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303079 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1303080 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303126 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1303584 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1303643 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1303644 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303703 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1303704 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303763 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1303764 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303810 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1304040 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304099 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1304100 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304159 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1304160 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304219 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1304220 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304266 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1304268 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304327 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1304328 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304387 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1304388 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304447 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1304448 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304494 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1304496 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304555 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1304556 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304615 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1304616 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304675 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1304676 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304722 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1304724 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304783 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1304784 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304843 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1304844 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304903 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1304904 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304950 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| || || || ||||| || | Sbjct 1304952 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1305011 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1305012 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1305071 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1305072 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1305131 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1305132 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1305178 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||||||||| || || || ||| |||||||| ||||| || | Sbjct 1305180 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1305239 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | ||||| || ||||| || || || ||||| || | |||| Sbjct 1305240 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1305299 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||| ||| Sbjct 1305300 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 1305359 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || ||||| || ||||| Sbjct 1305360 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1305406 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | |||||| || ||||| ||| || || || ||||| || | Sbjct 1302672 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1302731 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || || || ||||| || | |||| Sbjct 1302732 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1302791 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | ||| ||| Sbjct 1302792 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1302851 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| || || ||||| || || || || || ||||| Sbjct 1302852 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1302898 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || || || |||||||| | || | || Sbjct 1063139 AGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGG 1063198 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| || || || ||||| || | ||||| ||||||| Sbjct 1063199 CCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCC 1063258 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | ||||| | ||| ||||| | ||| Sbjct 1063259 TTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGTG 1063318 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || ||||| || ||||| Sbjct 1063319 ATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1063356 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || || || |||||||| | || | || Sbjct 1063367 AGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGG 1063426 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| || || || ||||| || | ||||| ||||||| Sbjct 1063427 CCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCC 1063486 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||| ||| ||||| | ||| Sbjct 1063487 TTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTG 1063546 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || || || || ||||| Sbjct 1063547 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1063584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937428220951