Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq26 167 4e-36
seq10 107 4e-18
>seq26
Length=1828681
Score = 167 bits (184), Expect = 4e-36
Identities = 785/1235 (64%), Gaps = 40/1235 (3%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| |||| || | || |||| ||||||||| || || |||| | |||||
Sbjct 22094 GCCATATCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 22035
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | ||| | || || ||
Sbjct 22034 AGCTTGCGCGCCTCGGGTGAATCGAACGGCATCGCCAAGGCCATGAATGCGTCGGCGAGA 21975
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | ||| || || | || ||| |
Sbjct 21974 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTCGATGAC 21916
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|||||| |||| ||| ||||| ||| | |||| | | | || ||| ||| |
Sbjct 21915 GGGGTAGTAGTTAACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 21856
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| ||| | || |||| |||| | |||| || | || ||| |||| ||||
Sbjct 21855 GTGCAGCTTCT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 21803
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549
| ||||| |||||| ||||| ||| | | | | |||||| ||||| |||||||
Sbjct 21802 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGC 21743
Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609
||||||| | ||| ||||| ||||||| ||||| || || ||| || | |
Sbjct 21742 ACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGT 21683
Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669
|||||||||||||| | ||| ||||| || | ||||| | | || ||| | ||| |
Sbjct 21682 CCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAA 21623
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726
| | || || | | | || | ||| | | || ||||| | |||
Sbjct 21622 GCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 21569
Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783
| || || ||| || | ||| | || || || || || || | ||||| |
Sbjct 21568 ACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 21512
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
| | ||| |||||| ||| | | ||||| || |||||| || || |||| ||| |
Sbjct 21511 AGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGA 21452
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
|||| ||| || || | | | || ||| || ||| ||||| || || |
Sbjct 21451 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 21392
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960
| || ||||||| ||| |||||||| ||||| | |||||| || ||||| || | ||
Sbjct 21391 GGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 21332
Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020
| ||||| || ||||| || | || ||||| ||| || || | ||| || |
Sbjct 21331 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGA 21272
Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080
||||| || | ||||| || || || || || ||||||| || | | |||| |
Sbjct 21271 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGA 21212
Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140
|| | || || ||||||||| ||||||||| | ||||| | | | || ||
Sbjct 21211 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGT 21152
Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
|||||| | || ||||| | | | | || |||||| ||| ||||| ||
Sbjct 21151 AGATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGT 21092
Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAGA 214257
| || || | |||||| || || || ||| ||| |||| | | | || |
Sbjct 21091 GAGGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCCGACA 21035
Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACC 214317
||| |||| | || || ||| ||||||||| |||||| | ||| |
Sbjct 21034 TGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGC 20975
Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGG 214374
||| |||||||| || || | || || | ||| | | || |||| || |
Sbjct 20974 GCATGAGCATGTGTTGCGGTCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAATACG 20918
Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409
||||||| || |||||||| ||||||||| ||||
Sbjct 20917 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAG 20883
>seq10
Length=1588530
Score = 107 bits (118), Expect = 4e-18
Identities = 164/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 48455 ATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCC 48514
||||| || || |||||| ||| ||||| | |||||| || | ||||| |||||
Sbjct 316087 ATCTGAAAGCCATAGAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTCG 316146
Query 48515 AGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574
| |||||||||||| || | ||||| ||||| || |||||||| || || || ||
Sbjct 316147 ACCAGATTCTCATTCACGACGCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGCGCAATA 316206
Query 48575 AAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCC 48631
|| | ||| |||| || | |||| | |||| | | | ||| ||||| || ||
Sbjct 316207 AAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTAGAGGTCGTTGCCGAGATCG 316266
Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
| ||||| | | ||| |||||||| | |||| |||||||||| |||| ||
Sbjct 316267 ATCTCTTCGGCGGACCAAAAGGACGCTTGAGCTTGTTTGTACATGGCCCAGAT 316319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532369166080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |