Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq26 260 3e-64
seq10 111 3e-19
seq33 86.0 1e-11
>seq26
Length=1828681
Score = 260 bits (288), Expect = 3e-64
Identities = 796/1216 (65%), Gaps = 41/1216 (3%)
Strand=Plus/Minus
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479
|| ||||||||||||||||| |||||| ||||||||| |||| |||||||| |||
Sbjct 22070 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCGGGTGAA 22014
Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537
||| ||||| ||| || |||| | ||||||| || || || |||||||| ||||
Sbjct 22013 TCGAACGGCAT-CGCCAAGGCCATGAATG-CGTCGGCGAGACCTTGCACTCCGATGCCGA 21956
Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597
|||| | ||| | |||||| ||| || ||||| || |||| ||||| |
Sbjct 21955 TGGGGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTAACGTCAA 21896
Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657
| | ||| | ||| | || || ||| || || |||||| |||||||| |||
Sbjct 21895 TGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTTCT------TGA 21842
Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717
| | || ||||| || || | | || ||| ||| | || |||||
Sbjct 21841 AGTCGTACACGCCGT--TCTTGATGAAGCTCGGCAAC-GCGAT--------CGA-GGCCA 21794
Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777
||| || ||||| ||||||| || |||| ||||| || || || |||||
Sbjct 21793 AGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTTCG 21734
Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837
||||||| || || |||| || || || || || || || |||||||||||||
Sbjct 21733 ACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGA 21674
Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897
|||| || || ||| || || | ||| ||| | |||||| || ||| || | | |
Sbjct 21673 GCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAAGCTTTTGCG 21614
Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC--CCGGTATAGAGCATGTC 221955
|| | |||| ||||| | ||||| |||||| || | | | || || |
Sbjct 21613 CGGGGATCGTCTTCTTGGCGCGGCCCTC---CTTTTCGTATTTCTCGAACAGGGCGCGG- 21558
Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015
|||| ||| || || | |||| ||||| || |||||| || | ||| |||
Sbjct 21557 -AACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGGGGCCA 21499
Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075
|| | | | | ||| | || ||||||||| || |||||||| ||||| |||||
Sbjct 21498 GTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAG 21439
Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135
||| | | || |||||| ||||| ||| || | || |||| |||||||| |
Sbjct 21438 ATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGAC 21379
Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195
||| |||||||| ||||| || |||| || | || ||||| |||||||||||||| ||
Sbjct 21378 GTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTG 21319
Query 222196 ATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCG 222255
|| || | | | | |||| ||| || || | || || | ||||| ||
Sbjct 21318 GTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTA 21259
Query 222256 ACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGA 222314
||||| ||||| ||||| | ||| || | | ||| ||| | || ||||
Sbjct 21258 GCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCGA 21200
Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374
||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || |
Sbjct 21199 TACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGA 21140
Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434
| || || ||||| | | | ||| || || ||||| | ||| | | | | | ||
Sbjct 21139 TCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCGG 21080
Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494
|||| || || || || |||||| |||||||||| | ||||| || | ||||| ||
Sbjct 21079 CGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGACT 21020
Query 222495 CTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACT 222554
| ||| | |||||| || ||||| || | |||| | |||| ||||| |
Sbjct 21019 GCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTT 20960
Query 222555 GGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612
| || | || | |||| | | | || |||| ||||| || || |||||
Sbjct 20959 GCGGTCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCGTCTT 20902
Query 222613 GAACCCAAAGTAGTTG 222628
||| ||||||||||||
Sbjct 20901 GAAGCCAAAGTAGTTG 20886
>seq10
Length=1588530
Score = 111 bits (122), Expect = 3e-19
Identities = 166/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| |||| |||||||| | |||||| || ||| ||||||||||||| |||||
Sbjct 316319 ATCTGGGCCATGTACAAACAAGCTCAAGCGTCCTTTTGGTCCGCCGAAGAGATCGATCTC 316260
Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
| ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| |
Sbjct 316259 GGCAACGACCTCTACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATTG 316202
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
| ||||| | || ||||| || || || ||||| | ||||| ||||||||| |||||
Sbjct 316201 CGCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGCGTCGTGAATGAGAATCTGGTCGAGA 316142
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
| ||| | || || ||||||| || ||||| | ||| ||||| || || |||||
Sbjct 316141 GGTTCTCAAGTGAGGTGCAGTTCGCCGAGGCGAGGTGCTTCTATGGCTTTCAGAT 316087
>seq33
Length=986392
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/199 (70%), Gaps = 7/199 (4%)
Strand=Plus/Plus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT 25567
||||||||||||||||| || || ||||||||||| | | |||| | |||| |
Sbjct 94918 TGGACCGCCGAAGAGATGGACTTGTCCAAGGACATGCATGACTGGGATAACAAGCTCAAG 94977
Query 25568 CCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627
|| ||||| | | || || | |||| | || || || || ||||| || || |
Sbjct 94978 CCC--GACGAACGCTACTTCATCTCGCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCA 95035
Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687
| || |||||||| || |||| ||||| | | || || |||| || |||||| |
Sbjct 95036 TCGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGAGGTCCAGTCCGCTGAGGCCCGAT 95095
Query 25688 GTTTCTACGGTTTCCAGAT 25706
| |||||||||||||| ||
Sbjct 95096 GCTTCTACGGTTTCCAAAT 95114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844370409280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |