Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq26 87.8 1e-11
>seq26
Length=1828681
Score = 87.8 bits (96), Expect = 1e-11
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || || || | | ||| || |||||||| || ||||| || |||||||||
Sbjct 1063406 TTGTAATCTGCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGT 1063465
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||| || ||||||||||||||||| ||||| ||||| || ||
Sbjct 1063466 TGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCC 1063525
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || || || || || || ||||| | ||||| ||||| |||||
Sbjct 1063526 GACGACTCGA-CCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTG 1063581
Score = 86.0 bits (94), Expect = 4e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || || || | | ||| || |||||||| || ||||| || |||||||||
Sbjct 1063178 TTGTAATCTGCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGT 1063237
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688
|| || || ||||| || |||||||||||||||||
Sbjct 1063238 TGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTT 1063272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177612890476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |