Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq26 159 4e-34 seq36 116 4e-21 seq33 114 2e-20 seq10 82.4 9e-11 >seq26 Length=1828681 Score = 159 bits (176), Expect = 4e-34 Identities = 546/848 (64%), Gaps = 11/848 (1%) Strand=Plus/Plus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| ||||||| ||||| ||||||||||||| | ||||| || |||||| || Sbjct 20963 ACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGT 21022 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | ||| || ||||| | | || | ||||| | || || |||||||| || | Sbjct 21023 CGTACAACCTCATGTCGGAGCGCTACTTTACCCACGCCTCGCCGACACTCTTCAACGCCG 21082 Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398 | || || |||||| | || |||||||| || | | ||||| || || ||| Sbjct 21083 GAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATCG 21142 Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458 | || ||||| | || || | | ||| |||| ||||| ||| || || ||||| | Sbjct 21143 AAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCG 21202 Query 75459 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 75518 | || |||||| | | | || | ||| || || || || || | | Sbjct 21203 GTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACT 21262 Query 75519 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578 | | || || | || ||||| || || | ||| || |||||||| || | |||| Sbjct 21263 CGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAAG 21322 Query 75579 CGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATA 75632 || ||||| | || || ||||| ||||| | || || ||||| ||||| Sbjct 21323 GTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGACG 21379 Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATC 75692 || | |||||||| || | || ||||| || | || || | || | | |||| Sbjct 21380 TCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATC 21439 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 |||| | | || ||||| || || || |||||| |||| || |||| | || | | Sbjct 21440 TCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCGACT 21499 Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812 || | || ||||| || | | | || || || ||| ||| | || || ||||| Sbjct 21500 GGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGTTCC 21559 Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG 75872 ||||| | | || || ||| ||||||| | ||||| ||| | || || || Sbjct 21560 GCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC-GCAA 21618 Query 75873 ATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 | | ||||| | || |||||| | | ||| || || || | || | ||||| ||| Sbjct 21619 AAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTAC 21678 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 ||||| || |||||||| ||||||||||| | || || |||||| || || Sbjct 21679 AAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAAC 21738 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 || ||||| ||||| | |||||| | | ||| ||| || || ||||| ||||| Sbjct 21739 CTGTGCACCGAAATCATCGAGTACTCCGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCC 21798 Query 76052 TCAATCGC 76059 || ||||| Sbjct 21799 TCGATCGC 21806 >seq36 Length=474693 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177747 AATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCC 177806 ||||||| | || |||||| ||| || | ||| || ||||||||||| | ||| || Sbjct 61929 AATCTTCCTCGTCACAAAGGTACGACCACGACGCGGGGACTCGTGGTTGAACAAGATACC 61870 Query 177807 GGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAA 177866 | ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 61869 GTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAA 61810 Query 177867 TTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTC 177926 |||| ||| || || || || ||||||||||| ||| ||| | ||| || || || Sbjct 61809 CTTGGCGACTCCGTAAGGTGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGGTCTC 61750 Query 177927 TCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || ||| ||| ||| || || ||||||||||| Sbjct 61749 GACGACCTTGCCATACAACTCGGAGGTCGAGGCTTGGTA 61711 >seq33 Length=986392 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||||||| | || || | || || ||||||||||||||||| ||| Sbjct 272415 ATCTTTCTGGTGACAAAGGTGCGGCCACGACGGGGGGACTCGTGGTTGAAGAGGATACCG 272474 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 272475 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 272534 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 272535 TTGGCGACTCCGTAGGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 272594 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 272595 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 272632 >seq10 Length=1588530 Score = 82.4 bits (90), Expect = 9e-11 Identities = 229/341 (67%), Gaps = 14/341 (4%) Strand=Plus/Plus Query 13561 CAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA--AAGTGTACTCTCATT 13618 |||| | || || ||||| || || |||||| | | | || ||||| || ||||| Sbjct 564398 CAAGCTCGAAGATGCGAATAACGCTGGTACG--AGGAACGGGTCCAAGTGCACACTCATC 564455 Query 13619 GTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGT 13678 | || || || ||||| || || | ||||| || ||||||| ||||||| ||||| Sbjct 564456 TTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCTGTCGTCGGTCGA 564515 Query 13679 GATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAG-AATGTTCGGGACGCTTCGGT 13737 || |||| ||||| ||||| | || || ||| || || || || || || ||| Sbjct 564516 GACAACTATGGTGTCTTCCCTTTGCGAGG-AAAGCTACTCAACGTGCGTGAAGCGGCGG- 564573 Query 13738 GGCACAGCTCACATCAAACCAG--GAG-TTCAA-CGATCTCAAGAAGATCCTTGGTCTTC 13793 ||| ||| | | || | | ||| ||||| ||||| ||| ||||| | ||||| | Sbjct 564574 -GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATC--AAGCAGATCTTAGGTCTGC 564630 Query 13794 AACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGA 13853 | || || |||| ||| || || || || || || || ||||| ||| Sbjct 564631 AGCAGGGCAAAGTTTACACCGACGTCGACTCGCTCCGTTACGGCAAGCTCATGATCATGG 564690 Query 13854 CAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894 | ||| ||| | ||||| || |||||||||||||| ||| Sbjct 564691 CCGATCAAGATCACGATGGATCGCACATCAAGGGTCTGATC 564731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569324086560