Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 4e-13 >seq28 Length=1306608 Score = 91.5 bits (100), Expect = 4e-13 Identities = 177/258 (69%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 302561 CAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATG 302620 ||| ||||| ||||| | ||||| | |||||| || || || || || || | Sbjct 446427 CAACCATAACATCTTCGAGGGCCTTGACGAGACGACGTTGGATGTACCCCGTCTCAGCCG 446368 Query 302621 TTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTT 302680 | || || || |||||||| | || | || || |||| || |||||||| | ||||| Sbjct 446367 TCTTGACGGCCGTATCAATCAATCCTTCTCGTCCGGCCATGGCGTGGAAGAAGAACTCTT 446308 Query 302681 CCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 |||| || | || | ||| | | || | ||||||||||| | ||| |||||||| | Sbjct 446307 GCGGT-GTCAAACCTCGCAAGTACG-AGTTTTCAACGAAACCCCTCGCTTCGGGCGAGTA 446250 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 ||| ||||||||| || |||| ||| | | || | || | || | ||| || || Sbjct 446249 ATCGTCCTTGGTAAAATGGGGCAAGGTACGATGCTTGAACCCAAACGGCACACGTTTGCC 446190 Query 302799 ATCAACGTTCTGCTGTCC 302816 || ||| |||| ||||| Sbjct 446189 CTCGACGATCTGTTGTCC 446172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816902266469