Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq26 228 1e-53
seq11 129 7e-24
>seq26
Length=1828681
Score = 228 bits (252), Expect = 1e-53
Identities = 287/393 (73%), Gaps = 17/393 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| || | ||| |||| ||||||||||| |||| |||||| ||
Sbjct 21320 TGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 21261
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| ||||| || | ||| | ||||| ||||| | ||||| | || |||
Sbjct 21260 TAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 21201
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 21200 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCG 21141
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| || ||||||| || || ||||||||||| |||||||| | ||| |||
Sbjct 21140 ATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCG 21081
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA-GGT 1630364
||||||||||| || |||| || ||| || | || ||||||| || ||| |
Sbjct 21080 GCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGAC 21021
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 21020 TGCAAG-ACGCGC------------TCGATGTCGTGA---CCGTGGATGCCGACGGCGAC 20977
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457
|||||||||||||| || || || ||| ||||
Sbjct 20976 GCGCATGAGCATGTGTTGCGGTCGTTCGGCGAC 20944
Score = 129 bits (142), Expect = 7e-24
Identities = 289/440 (66%), Gaps = 2/440 (0%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221
||| || ||| |||||||||||||| | |||| | |||| || ||||||| ||||| |
Sbjct 21760 ACTCGATGATTTCGGTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCG 21701
Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281
|| ||| |||||||||||| ||||||| | || |||||| |||| ||| |||
Sbjct 21700 ATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCT 21641
Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| || || |||| | || ||||||| | || | || ||||||||||
Sbjct 21640 CGAGAATCGCGTACCAAAGCTTTTGCGCGGGGATCGTCT-TCTTGGCGCGGCCCTCCTTT 21582
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| | |||| || ||||| |||||||| ||
Sbjct 21581 TCGTATTTCTCGAACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCT 21522
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460
|||| || || || || | ||||||||| ||| | | | || ||| ||||| ||
Sbjct 21521 TCGGCGGGGCAGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCG 21462
Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520
|||| || || | ||||| || || || ||| ||||||||||||||||||||
Sbjct 21461 GGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTG 21402
Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 1628580
||||| || | || | | |||||||||||| ||||| |||||| || |||||
Sbjct 21401 CGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCT 21342
Query 1628581 CCCTTGCGCTTGCCGCCGCC 1628600
|| |||||| ||| ||
Sbjct 21341 CCGGGACGCTTGTTGCCACC 21322
Score = 122 bits (134), Expect = 1e-21
Identities = 173/241 (72%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
||||||||||| |||| ||| || || |||||| || ||||||| |||||||||||
Sbjct 22934 TGGTCGACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACATGCCC 22875
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
|| || || || || ||| ||||| |||||||||||||| || | ||||| |
Sbjct 22874 GTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGTCGGG 22815
Query 1627102 -TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGC 1627160
||| | ||| | ||||||||| || |||||||| ||| | || ||||| |
Sbjct 22814 CTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGGTCGGCGGA 22756
Query 1627161 CATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTC 1627220
|| ||| ||| || | | | | |||||| ||||||||| ||||||||||||| ||
Sbjct 22755 CAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTGTAGATGGCCTTGAGATC 22696
Query 1627221 G 1627221
|
Sbjct 22695 G 22695
Score = 100 bits (110), Expect = 3e-15
Identities = 103/132 (78%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 1540667 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCTGTG 1540726
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | |||||||||||||||||||| || || ||||||||
Sbjct 1540727 -TTCGACAAGCTGGAAGCCCTCTTGGCCCACGCCATGCTGTCGATTCCCGCAACCAAGGG 1540785
Query 19172 ATTCGAGATTGG 19183
|||||||||||
Sbjct 1540786 TTTCGAGATTGG 1540797
Score = 91.5 bits (100), Expect = 2e-12
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
||||||| || ||||| ||||||| |||| || | | || || || || |
Sbjct 1460236 TCGACGTTGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGG 1460177
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||||||| | ||||||||||||| ||||||| | || ||| |||||||| |
Sbjct 1460176 GTCGCCACAAGCTCGTCATCCTCGACGAAGCCGACTCGATGACCCCGGGAGCCCAGCAAG 1460117
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
| || || || ||||||| | ||||||| || ||||| ||| | |||||||||
Sbjct 1460116 CGCTCCGCAGGACGATGGAAATCTTCTCCAACACCACCCGCTTCGCCTTTGCGTGCAACC 1460057
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230
| | |||||||| | | |||||||| ||||||||
Sbjct 1460056 AGAGCAACAAAATCATCGAGCCGATTCAAAGTCGATGCGCCAT 1460014
>seq11
Length=1812982
Score = 129 bits (142), Expect = 7e-24
Identities = 151/203 (74%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 615684 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 615743
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | ||||||||| ||||||| ||||
Sbjct 615744 TGGTCGACTTGCGGTTGT---AGCCCGCGAGCTTGGACGCCTCGGTGGCGATGCGCTCGA 615800
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | |||||| |||||| ||||| || |||||
Sbjct 615801 AGATGTCGTTGACGAACGAGTTGAGGATCAACATCGCCTTGTTCGAGATACCGGTGTCGG 615860
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||||| | |||||||
Sbjct 615861 GGTGGACCTGCTTCAACACCTTG 615883
Score = 129 bits (142), Expect = 7e-24
Identities = 151/203 (74%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 665887 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 665828
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | ||||||||| ||||||| ||||
Sbjct 665827 TGGTCGACTTGCGGTTGT---AGCCCGCGAGCTTGGACGCCTCGGTGGCGATGCGCTCGA 665771
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | |||||| |||||| ||||| || |||||
Sbjct 665770 AGATGTCGTTGACGAACGAGTTGAGGATCAACATCGCCTTGTTCGAGATACCGGTGTCGG 665711
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||||| | |||||||
Sbjct 665710 GGTGGACCTGCTTCAACACCTTG 665688
Score = 105 bits (116), Expect = 8e-17
Identities = 146/203 (72%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| ||| | | ||||| ||| || | ||| |||||||| |||| ||
Sbjct 300033 GCTTGGACAATTCTCCGGGGAGGATCAAGCGAACCGAGGTTTGGATCTCTCGCGACGAGA 299974
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | ||||||||| |||| || ||||
Sbjct 299973 TGGTCGACTTGCGGTTGT---AGCCCGCGAGCTTGGATGCCTCGGTGGCGATACGCTCGA 299917
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| |||||
Sbjct 299916 AGATGTCGTTGACGAACGAGTTGAGGATAAGCATCGCCTTGTTCGAGATACCCGTGTCGG 299857
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||||| | ||| |||
Sbjct 299856 GGTGAACTTGCTTCAACACTTTG 299834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136163606729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |